BLASTX nr result
ID: Cephaelis21_contig00039200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00039200
(682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 68 2e-18
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu... 59 1e-15
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 78 3e-15
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 78 3e-15
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 78 7e-15
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 67.8 bits (164), Expect(2) = 2e-18
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = -1
Query: 655 WNAELVHQTLD*REAEFILQIPVSQLNVKDRLVWQHTKNGNFSVESAYRWLASQHEQSRM 476
WN EL++ E+ I +IPV+ D+ +W +KNG F+V SAY + ++
Sbjct: 981 WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKT-- 1038
Query: 475 DLGSNSGIASEKKMWKCLWGLKIQGKIKHFIWRLYHKILPTKERLQRKGLQIDG 314
G ++ K+W+ +W KI K+K F W+ H L ++++G+ IDG
Sbjct: 1039 --GPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDG 1090
Score = 50.4 bits (119), Expect(2) = 2e-18
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -2
Query: 285 ETTEYIFFHCKDSQLIWQLSPVKWDGIQALTSDFQGWWNQVCNVGNKAIHRDRIEFSAY- 109
ETTE++ + C +S W +SP++ F+ W + + H+D ++ +
Sbjct: 1100 ETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDT-----HKDTEWWALFW 1154
Query: 108 -LLWEIWKRRNAWCFSEKIISVKEVVDRSL 22
+ W IW RN W F +K ++ +EVV+R++
Sbjct: 1155 MICWNIWLGRNKWVFEKKKLAFQEVVERAV 1184
>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
gi|223537282|gb|EEF38913.1| RNA binding protein,
putative [Ricinus communis]
Length = 446
Score = 58.5 bits (140), Expect(2) = 1e-15
Identities = 39/115 (33%), Positives = 55/115 (47%)
Frame = -1
Query: 655 WNAELVHQTLD*REAEFILQIPVSQLNVKDRLVWQHTKNGNFSVESAYRWLASQHEQSRM 476
WN LV ++AE ILQI S D W H+ +G FS S Y ++A +
Sbjct: 57 WNCNLVRACFSQQDAEAILQIKPSHRKSPDVRYWVHSNSGIFSSRSTY-YIAWNSLLNFT 115
Query: 475 DLGSNSGIASEKKMWKCLWGLKIQGKIKHFIWRLYHKILPTKERLQRKGLQIDGI 311
++ G A KC W L I +KHF+WRL H +LP E L+ + + + I
Sbjct: 116 PPSTSHGTAPVVN--KC-WRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDMGEI 167
Score = 50.1 bits (118), Expect(2) = 1e-15
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = -2
Query: 288 VETTEYIFFHCKDSQLIWQLSPVKWDGIQALTSDFQGWWNQVCNVGNKAIHRDRIEFSAY 109
VET Y+F C+ + W P+ + D + W NQ+ +VG+ D IE A
Sbjct: 175 VETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSVGDD----DFIEKFAM 230
Query: 108 LLWEIWKRRNAWCFSEKIISVKEVVDRSLV 19
LLW W RN + F K V V R+LV
Sbjct: 231 LLWCYWNLRNKFIFERKEEDVVTTVQRALV 260
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 77.8 bits (190), Expect(2) = 3e-15
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = -1
Query: 682 ELMYTGGSGWNAELVHQTLD*REAEFILQIPVSQLNVKDRLVWQHTKNGNFSVESAY--R 509
EL+ GW+ +L+ +A ILQIP+S +D + W HT++G FSV SAY +
Sbjct: 779 ELINPVSGGWDEDLIDTLFWPIDANRILQIPISA-GREDFVAWHHTRSGIFSVRSAYHCQ 837
Query: 508 WLASQHEQSRMDLGSNSGIASEKKMWKCLWGLKIQGKIKHFIWRLYHKILPTKERLQRKG 329
W A + R+ G++S S + +W LW L+I KIK F WR+ H ++P K L K
Sbjct: 838 WNAKFGSKERLPDGASS---SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKH 894
Query: 328 LQIDG 314
+ + G
Sbjct: 895 IAVQG 899
Score = 29.6 bits (65), Expect(2) = 3e-15
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = -2
Query: 288 VETTEYIFFHCKDSQLIWQLSPVKWDGIQALTS-DFQG--WWNQVCNVGNKAIHRDRIEF 118
VE +++ F C+ ++LIW+ + W IQ + D G ++ G K H + I
Sbjct: 908 VEDIKHMVFTCRRAKLIWKQLGI-WSRIQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGM 966
Query: 117 SAYLL---WEIWKRRNAWCFSEKI 55
+ +L W IW R E+I
Sbjct: 967 TELILTGAWYIWWERRQLVQGERI 990
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 77.8 bits (190), Expect(2) = 3e-15
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = -1
Query: 682 ELMYTGGSGWNAELVHQTLD*REAEFILQIPVSQLNVKDRLVWQHTKNGNFSVESAY--R 509
EL+ GW+ +L+ +A ILQIP+S +D + W HT++G FSV SAY +
Sbjct: 779 ELINPVSGGWDEDLIDTLFWPIDANRILQIPISA-GREDFVAWHHTRSGIFSVRSAYHCQ 837
Query: 508 WLASQHEQSRMDLGSNSGIASEKKMWKCLWGLKIQGKIKHFIWRLYHKILPTKERLQRKG 329
W A + R+ G++S S + +W LW L+I KIK F WR+ H ++P K L K
Sbjct: 838 WNAKFGSKERLPDGASS---SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKH 894
Query: 328 LQIDG 314
+ + G
Sbjct: 895 IAVQG 899
Score = 29.6 bits (65), Expect(2) = 3e-15
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = -2
Query: 288 VETTEYIFFHCKDSQLIWQLSPVKWDGIQALTS-DFQG--WWNQVCNVGNKAIHRDRIEF 118
VE +++ F C+ ++LIW+ + W IQ + D G ++ G K H + I
Sbjct: 908 VEDIKHMVFTCRRAKLIWKQLGI-WSRIQPILGFDRSGSVLVEEMIRKGGKVSHLNAIGM 966
Query: 117 SAYLL---WEIWKRRNAWCFSEKI 55
+ +L W IW R E+I
Sbjct: 967 TELILTGAWYIWWERRQLVQGERI 990
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 77.8 bits (190), Expect(2) = 7e-15
Identities = 38/119 (31%), Positives = 63/119 (52%)
Frame = -1
Query: 682 ELMYTGGSGWNAELVHQTLD*REAEFILQIPVSQLNVKDRLVWQHTKNGNFSVESAYRWL 503
+LM WN EL+ + + R+ + IL IP+S ++D L W ++K+G +SV++AY
Sbjct: 968 DLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYM-- 1025
Query: 502 ASQHEQSRMDLGSNSGIASEKKMWKCLWGLKIQGKIKHFIWRLYHKILPTKERLQRKGL 326
LG + ++W LW L + K++HF+WR LP ++ LQR+ L
Sbjct: 1026 ----------LGKGGNLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHL 1074
Score = 28.5 bits (62), Expect(2) = 7e-15
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = -2
Query: 291 EVETTEYIFFHCKDSQLIWQL--SPVKWDGIQ--ALTSDFQGWWNQVCNVGNKAIHRDRI 124
E ET ++F+ C S +W+ S + GI+ A+ W V K
Sbjct: 1086 EDETQFHLFYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQMDAKVVQKG------ 1139
Query: 123 EFSAYLLWEIWKRRNAWCF 67
Y+LW +W RN F
Sbjct: 1140 ---CYILWNVWVERNRRVF 1155