BLASTX nr result

ID: Cephaelis21_contig00039024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039024
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319949.1| f-box family protein [Populus trichocarpa] g...    52   3e-13

>ref|XP_002319949.1| f-box family protein [Populus trichocarpa]
           gi|222858325|gb|EEE95872.1| f-box family protein
           [Populus trichocarpa]
          Length = 340

 Score = 52.4 bits (124), Expect(2) = 3e-13
 Identities = 26/60 (43%), Positives = 35/60 (58%)
 Frame = +2

Query: 2   FLPTTTAVQTSVVARKWCNLWHSIPVLDFCMFEFYCYSPDKSIRDTRQLFAEFISRTLLL 181
           FLPT   + TS+++ KW  LW  +P L+F    F    P  +   TRQ F+EFI RTL+L
Sbjct: 41  FLPTLDTITTSLISTKWKPLWSLVPSLNFSYTHF---PPYNNFSTTRQFFSEFIDRTLIL 97



 Score = 47.4 bits (111), Expect(2) = 3e-13
 Identities = 32/89 (35%), Positives = 46/89 (51%)
 Frame = +1

Query: 190 PLEKFHLFFDFINCDTIRAYVNSWVRYAIGSKATEIELDLDSNFAIHLLLRIGKHVDFSR 369
           PL+KF L  +FI  D    +V+SWVRYAI ++  E++LD   + + H+            
Sbjct: 102 PLKKFRL--EFIYEDRYGYHVDSWVRYAIKNQVLELDLDFFIDKSFHIF----------- 148

Query: 370 AIENADDDIYRYYDFHFSHLINSSVQVLK 456
                + +    YDF FS L NS V+VLK
Sbjct: 149 -----EPEAKPNYDFPFSALRNSKVRVLK 172


Top