BLASTX nr result

ID: Cephaelis21_contig00038960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038960
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...    80   2e-13
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...    79   5e-13
ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...    75   7e-12
ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003625879.1| Peptide chain release factor [Medicago trunc...    70   1e-10

>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/83 (55%), Positives = 56/83 (67%)
 Frame = +1

Query: 157 MNSLSTCFTAQISASRSMQIPVVRVVRRLCLYPSRTKPAFLKPFPARMKLRRFVCMAEPY 336
           MNSL+  FTA+I A+R     ++  +R   L+P  T+    K  P R+     VCMAEPY
Sbjct: 15  MNSLTASFTARICATRR---DLLLPIRHRSLHPFTTRRVATKLTPPRI-----VCMAEPY 66

Query: 337 LITKLESAEKTWQELSVKLADPD 405
           LITKLESAEKTW+ELSVKLADPD
Sbjct: 67  LITKLESAEKTWKELSVKLADPD 89


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/83 (55%), Positives = 54/83 (65%)
 Frame = +1

Query: 157 MNSLSTCFTAQISASRSMQIPVVRVVRRLCLYPSRTKPAFLKPFPARMKLRRFVCMAEPY 336
           MNSL+  FTA+I A+R   + +    R    +P  T+    K  P R+     VCMAEPY
Sbjct: 15  MNSLTASFTARICATRRDLLHI----RHRSFHPLTTRRVATKLTPPRI-----VCMAEPY 65

Query: 337 LITKLESAEKTWQELSVKLADPD 405
           LITKLESAEKTWQELSVKLADPD
Sbjct: 66  LITKLESAEKTWQELSVKLADPD 88


>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|296086617|emb|CBI32252.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/83 (55%), Positives = 52/83 (62%)
 Frame = +1

Query: 157 MNSLSTCFTAQISASRSMQIPVVRVVRRLCLYPSRTKPAFLKPFPARMKLRRFVCMAEPY 336
           MNSL+T F A+  A R+ Q+   RV       PSRT            +  R VCMAEPY
Sbjct: 1   MNSLTTSFAARFPA-RAEQVFCNRVRSFALFRPSRTH-----------RTPRIVCMAEPY 48

Query: 337 LITKLESAEKTWQELSVKLADPD 405
           LITKLESAEKTW+ELSVKLADPD
Sbjct: 49  LITKLESAEKTWKELSVKLADPD 71


>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/82 (54%), Positives = 52/82 (63%)
 Frame = +1

Query: 160 NSLSTCFTAQISASRSMQIPVVRVVRRLCLYPSRTKPAFLKPFPARMKLRRFVCMAEPYL 339
           NSL+T     ++A  S  IP     R+    PSR    FL+P  +R    R VCMAEPYL
Sbjct: 3   NSLAT---TSLTARMSPTIPHPHHFRQT---PSRI--FFLRPTLSRSTTPRIVCMAEPYL 54

Query: 340 ITKLESAEKTWQELSVKLADPD 405
           ITKLESAEKTW+ELSVKL DPD
Sbjct: 55  ITKLESAEKTWKELSVKLGDPD 76


>ref|XP_003625879.1| Peptide chain release factor [Medicago truncatula]
           gi|355500894|gb|AES82097.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 421

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/83 (48%), Positives = 53/83 (63%)
 Frame = +1

Query: 157 MNSLSTCFTAQISASRSMQIPVVRVVRRLCLYPSRTKPAFLKPFPARMKLRRFVCMAEPY 336
           MNSL+  FTA+I  +R   +    ++R   ++    +   L P    +   RFVCMAEPY
Sbjct: 1   MNSLTASFTARIYGTRCDVV----LLRNRSVHQFNNRRVTLLP---TLTSTRFVCMAEPY 53

Query: 337 LITKLESAEKTWQELSVKLADPD 405
           L+ KLESAEKTW++LSVKLADPD
Sbjct: 54  LLLKLESAEKTWKDLSVKLADPD 76


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