BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038933
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    53   2e-12
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   1e-11
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    47   3e-11
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    52   5e-11
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    50   6e-11

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 53.1 bits (126), Expect(2) = 2e-12
 Identities = 22/54 (40%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   LFTSSDSGGWEDKLSGIPATITDTMNSNLIKPVEDGEIKAAVFSMNPNKAPGLD 162
           LFT++ +  WE+ +SGI   +T+ MN  L++ V D E++ AVF++  ++APG D
Sbjct: 758 LFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFD 811



 Score = 43.9 bits (102), Expect(2) = 2e-12
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +2

Query: 200 TPYFFQNFWHIIQDDICKVVKSFFNSSVLLKSFNHTLVSFIPKTQKPSKISHF 358
           T  F+ + W +I +D+C +V+ FF S V+    N T +  IPK   P  +S +
Sbjct: 814 TAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDY 866


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 63.5 bits (153), Expect(2) = 1e-11
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = +2

Query: 203 PYFFQNFWHIIQDDICKVVKSFFNSSVLLKSFNHTLVSFIPKTQKPSKISHF 358
           PYFFQ +W +I   +C+ V++FF+S  +LK  NHT ++ IPK  KP   +HF
Sbjct: 469 PYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHF 520



 Score = 30.4 bits (67), Expect(2) = 1e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 61  ITDTMNSNLIKPVEDGEIKAAVFSMNPNKAPGLD 162
           +++  N+ L   V   EIK AVF + P+K+PG D
Sbjct: 432 VSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPD 465


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 46.6 bits (109), Expect(2) = 3e-11
 Identities = 20/45 (44%), Positives = 30/45 (66%)
 Frame = +1

Query: 28  WEDKLSGIPATITDTMNSNLIKPVEDGEIKAAVFSMNPNKAPGLD 162
           ++  L  +P  IT+ MN +L K +   E+K A+FS+NP+KAPG D
Sbjct: 352 FDSALQEVPVLITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPD 396



 Score = 46.2 bits (108), Expect(2) = 3e-11
 Identities = 17/53 (32%), Positives = 34/53 (64%)
 Frame = +2

Query: 200 TPYFFQNFWHIIQDDICKVVKSFFNSSVLLKSFNHTLVSFIPKTQKPSKISHF 358
           T +F+Q++W +   D+ K+V++F ++    +  N T +  IPKT++P K++ F
Sbjct: 399 TAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKMAEF 451


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 52.4 bits (124), Expect(2) = 5e-11
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = +1

Query: 1   LFTSSDSGGWEDKLSGIPATITDTMNSNLIKPVEDGEIKAAVFSMNPNKAPGLD 162
           LF SS+  G+     G  A + D MN  LI+PV   EIK AVFS++P+ APG D
Sbjct: 284 LFKSSNPSGFSHWFVGFEAKVIDQMNERLIRPVSSEEIKDAVFSIDPSSAPGSD 337



 Score = 39.7 bits (91), Expect(2) = 5e-11
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +2

Query: 209 FFQNFWHIIQDDICKVVKSFFNSSVLLKSFNHTLVSFIPKTQKPSKIS 352
           FFQ++W I+ D + + VK  F + V+   +N+T +  IPK   P  +S
Sbjct: 343 FFQHYWAIVGDHVTREVKMVFQTGVMPTEWNYTHLCLIPKVTHPVLMS 390


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 50.4 bits (119), Expect(2) = 6e-11
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = +1

Query: 1   LFTSSDSGGWEDKLSGIPATITDTMNSNLIKPVEDGEIKAAVFSMNPNKAPGLD 162
           LF S D G   ++L  +   ++D MN+NL+ P+   E++ A FS+NP+K PG D
Sbjct: 396 LFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPD 449



 Score = 41.2 bits (95), Expect(2) = 6e-11
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 206 YFFQNFWHIIQDDICKVVKSFFNSSVLLKSFNHTLVSFIPKTQKPSKISHF 358
           + +Q FW  + D I ++V++FF S  + +  N T +  IPK  K  K++ F
Sbjct: 454 FLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDF 504