BLASTX nr result

ID: Cephaelis21_contig00038789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038789
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    74   2e-16
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    71   1e-15
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                80   2e-15
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          67   3e-14
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    75   3e-14

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 73.6 bits (179), Expect(2) = 2e-16
 Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1   LTKHIQKTIPGCMFFA-DIVLIDNTRR-VNTKLEVWREALESKGFKISRNKIEYMKCHFS 174
           LT HIQ  IP CM FA DIVLID T+  VN KL +WRE LESKG  +SR+K EYM+C FS
Sbjct: 383 LTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYMECKFS 442



 Score = 37.0 bits (84), Expect(2) = 2e-16
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +3

Query: 189 VKIGEHDLEISKSFEYLGSILQENGGIDE 275
           V+IG+ ++  S  F YLGSILQ+NG +DE
Sbjct: 452 VRIGDQEIPKSDRFRYLGSILQKNGELDE 480


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 70.9 bits (172), Expect(2) = 1e-15
 Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1    LTKHIQKTIPGCMFFAD-IVLIDNTRR-VNTKLEVWREALESKGFKISRNKIEYMKCHFS 174
            LT+HIQ+ +P CM FAD IVL+  +R  +N KLE+WREALE  G +ISR+K EYM+C FS
Sbjct: 1131 LTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEVYGLRISRSKTEYMECKFS 1190



 Score = 37.0 bits (84), Expect(2) = 1e-15
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 189  VKIGEHDLEISKSFEYLGSILQENGGIDE 275
            VKIGE+ L   KSF+YLG I+Q+NG I++
Sbjct: 1200 VKIGENILRKVKSFKYLGCIIQDNGEIEQ 1228


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 80.5 bits (197), Expect(2) = 2e-15
 Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   LTKHIQKTIPGCMFFAD-IVLIDNTR-RVNTKLEVWREALESKGFKISRNKIEYMKCHFS 174
           LT+ IQ+T+P CM FAD IVLID TR RVN +LEVWR+ LESKGF++SR K EY+ C FS
Sbjct: 423 LTRSIQETVPWCMLFADDIVLIDETRDRVNARLEVWRQTLESKGFRLSRTKTEYLGCKFS 482

Query: 175 N 177
           +
Sbjct: 483 D 483



 Score = 26.6 bits (57), Expect(2) = 2e-15
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 189 VKIGEHDLEISKSFEYLGSILQENGGIDE 275
           V++    +   +SF YLG+++Q +G ID+
Sbjct: 492 VRLAAQVIPKKESFRYLGAVIQGSGDIDD 520


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 67.4 bits (163), Expect(2) = 3e-14
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1   LTKHIQKTIPGCMFFAD-IVLIDNTRR-VNTKLEVWREALESKGFKISRNKIEYMKCHFS 174
           LT+HIQ+ +P C+ FAD IVL+   R  +N KLE+W+EALE  G +ISR+K EYM+C FS
Sbjct: 273 LTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYMECKFS 332



 Score = 35.4 bits (80), Expect(2) = 3e-14
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +3

Query: 189 VKIGEHDLEISKSFEYLGSILQENGGIDE 275
           V+IGE+ L   KSF+YLG I+Q+NG I++
Sbjct: 342 VEIGENILRKVKSFKYLGCIIQDNGEIEQ 370


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 75.1 bits (183), Expect(2) = 3e-14
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
 Frame = +1

Query: 1   LTKHIQKTIPGCMFFAD-IVLIDNTRR-VNTKLEVWREALESKGFKISRNKIEYMKCHFS 174
           +T+ IQ  IP CM FAD +VL+D++R  VN KLE+WR+ LESKGF++SR K EYMKC FS
Sbjct: 37  VTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMKCGFS 96

Query: 175 NS 180
            +
Sbjct: 97  TT 98



 Score = 27.7 bits (60), Expect(2) = 3e-14
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 225 SFEYLGSILQENGGIDE 275
           +F YLGS+LQ++G IDE
Sbjct: 119 TFRYLGSMLQKDGDIDE 135


Top