BLASTX nr result

ID: Cephaelis21_contig00038780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038780
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302564.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...   121   5e-26
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              119   3e-25

>ref|XP_002302564.1| predicted protein [Populus trichocarpa] gi|222844290|gb|EEE81837.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 74/93 (79%)
 Frame = +1

Query: 67  SLFDTNRYLGELVKSGQIDEARKLFEAMPERDEFTWNTMVSGYADSGRLNEARKVFDRTP 246
           S  ++NR L +L K G+ID+AR LF+ M +RDEF+WNTMV+GYA+SGRL EA+K+F  TP
Sbjct: 26  SRLESNRVLKDLSKRGRIDDARNLFDKMLDRDEFSWNTMVAGYANSGRLTEAKKLFYETP 85

Query: 247 NKSSITWSSLISGYCKYGNETEGFGLFRQMQKE 345
            KSSITW+SL+SGYC+YG E E F LF +MQ E
Sbjct: 86  MKSSITWTSLLSGYCRYGFENEAFELFLEMQLE 118


>ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/99 (57%), Positives = 79/99 (79%)
 Frame = +1

Query: 49  LAPAKSSLFDTNRYLGELVKSGQIDEARKLFEAMPERDEFTWNTMVSGYADSGRLNEARK 228
           +A +  S+F +N+ L  L KSGQID+AR+LF+ M +RDE+TWNTMVSGYA+ GRL EAR+
Sbjct: 108 IADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARE 167

Query: 229 VFDRTPNKSSITWSSLISGYCKYGNETEGFGLFRQMQKE 345
           +F+   ++SSITWSSLISGYC++G + E F LF++M+ E
Sbjct: 168 LFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLE 206


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/98 (56%), Positives = 76/98 (77%)
 Frame = +1

Query: 52  APAKSSLFDTNRYLGELVKSGQIDEARKLFEAMPERDEFTWNTMVSGYADSGRLNEARKV 231
           A +  S++ TN+ L +L KSGQ+++ARKLF+ MP++DE++WNTM+S Y + GRL EAR++
Sbjct: 59  AASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEAREL 118

Query: 232 FDRTPNKSSITWSSLISGYCKYGNETEGFGLFRQMQKE 345
           FD    KSSITWSS+ISGYCK+G + E F LFR M+ E
Sbjct: 119 FDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLE 156


>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/90 (61%), Positives = 69/90 (76%)
 Frame = +1

Query: 76  DTNRYLGELVKSGQIDEARKLFEAMPERDEFTWNTMVSGYADSGRLNEARKVFDRTPNKS 255
           D+N  L  L K G++D+ARKLF+ MP+RDE +WNTM+  YA+SGRLNEARK+F  TP +S
Sbjct: 43  DSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRS 102

Query: 256 SITWSSLISGYCKYGNETEGFGLFRQMQKE 345
            ITWSSLISGYC+YG + E   LF +MQ E
Sbjct: 103 CITWSSLISGYCRYGCDVEALELFWEMQYE 132


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/90 (61%), Positives = 69/90 (76%)
 Frame = +1

Query: 76  DTNRYLGELVKSGQIDEARKLFEAMPERDEFTWNTMVSGYADSGRLNEARKVFDRTPNKS 255
           D+N  L  L K G++D+ARKLF+ MP+RDE +WNTM+  YA+SGRLNEARK+F  TP +S
Sbjct: 43  DSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRS 102

Query: 256 SITWSSLISGYCKYGNETEGFGLFRQMQKE 345
            ITWSSLISGYC+YG + E   LF +MQ E
Sbjct: 103 CITWSSLISGYCRYGCDVEALELFWEMQYE 132


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