BLASTX nr result

ID: Cephaelis21_contig00038777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038777
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...    85   1e-14
emb|CBI37903.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09

>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -1

Query: 206 PCIVRNFLNLCSEGHLQEAINSLDLLAQKGIRLDSQALAFLLLKCGDLKDHRLGKWVHYH 27
           PCIV++ L+L S+G L +AI+SL LL++ GIRL S+ LA+LL +C + K  +LGKWVH H
Sbjct: 16  PCIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLH 75

Query: 26  LKVTGLK 6
           LKVTGLK
Sbjct: 76  LKVTGLK 82


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 50/73 (68%)
 Frame = -1

Query: 224 RPPSKNPCIVRNFLNLCSEGHLQEAINSLDLLAQKGIRLDSQALAFLLLKCGDLKDHRLG 45
           R P + PC+V   + LC +  L EA++SL+ LA++G+RLDS+ LA LL  C D +  R G
Sbjct: 19  RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREG 78

Query: 44  KWVHYHLKVTGLK 6
           K VH HLK+TGLK
Sbjct: 79  KRVHLHLKLTGLK 91


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 50/73 (68%)
 Frame = -1

Query: 224 RPPSKNPCIVRNFLNLCSEGHLQEAINSLDLLAQKGIRLDSQALAFLLLKCGDLKDHRLG 45
           R P + PC+V   + LC +  L EA++SL+ LA++G+RLDS+ LA LL  C D +  R G
Sbjct: 19  RKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREG 78

Query: 44  KWVHYHLKVTGLK 6
           K VH HLK+TGLK
Sbjct: 79  KRVHLHLKLTGLK 91


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/101 (43%), Positives = 56/101 (55%)
 Frame = -1

Query: 308 MPSFFSRTRILESNIKLRTNNGNKSRLVRPPSKNPCIVRNFLNLCSEGHLQEAINSLDLL 129
           MPSF S+        K   + G KS+  RP S   CI ++ L+L S+G L EA++ LD L
Sbjct: 1   MPSFSSQA------FKTPASFGPKSKQ-RPDSTGLCIAQSLLDLSSQGRLPEALSYLDRL 53

Query: 128 AQKGIRLDSQALAFLLLKCGDLKDHRLGKWVHYHLKVTGLK 6
           AQ+GIRL +     LL  C   K  + GK VH HLK TG K
Sbjct: 54  AQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK 94


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/101 (42%), Positives = 57/101 (56%)
 Frame = -1

Query: 308 MPSFFSRTRILESNIKLRTNNGNKSRLVRPPSKNPCIVRNFLNLCSEGHLQEAINSLDLL 129
           MPSF S+        K   + G KS+  RP S + CI ++ L+L S+G L EA++ LD L
Sbjct: 1   MPSFSSQA------FKTPASFGPKSKQ-RPDSTSLCIAQSLLDLSSQGRLPEALSYLDRL 53

Query: 128 AQKGIRLDSQALAFLLLKCGDLKDHRLGKWVHYHLKVTGLK 6
           AQ+G+RL +     LL  C   K  + GK VH HLK TG K
Sbjct: 54  AQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK 94


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