BLASTX nr result

ID: Cephaelis21_contig00038766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038766
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564029.1| Late embryogenesis abundant (LEA) hydroxyprolin...    55   5e-06
gb|AAG40365.1|AF325013_1 At1g17620 [Arabidopsis thaliana]              55   5e-06

>ref|NP_564029.1| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein
           family [Arabidopsis thaliana]
           gi|8778464|gb|AAF79472.1|AC022492_16 F1L3.32
           [Arabidopsis thaliana]
           gi|17386166|gb|AAL38629.1|AF446896_1 At1g17620/F11A6_23
           [Arabidopsis thaliana] gi|15450635|gb|AAK96589.1|
           At1g17620/F11A6_23 [Arabidopsis thaliana]
           gi|110742816|dbj|BAE99309.1| hypothetical protein
           [Arabidopsis thaliana] gi|332191494|gb|AEE29615.1| Late
           embryogenesis abundant (LEA) hydroxyproline-rich
           glycoprotein family [Arabidopsis thaliana]
          Length = 264

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
 Frame = +2

Query: 5   CCALTSDVIRWAIIVLVWFAIASIFYTSHNPKFQIETVSVGPLN-TSDPRMATNWVAEVS 181
           CC     +I   +IV    A+  + Y    P F +  + +  LN TS  R+ T     V 
Sbjct: 62  CCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTAISLSVI 121

Query: 182 VRNPNPRTDVIYDNFEVTLMLAETG--QNLCLGK--IEPFSQWPKTTTTVKA 325
            RNPN     IYD  ++TL  A TG   ++ +GK  I  FS   K TTT+++
Sbjct: 122 ARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRS 173


>gb|AAG40365.1|AF325013_1 At1g17620 [Arabidopsis thaliana]
          Length = 265

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
 Frame = +2

Query: 5   CCALTSDVIRWAIIVLVWFAIASIFYTSHNPKFQIETVSVGPLN-TSDPRMATNWVAEVS 181
           CC     +I   +IV    A+  + Y    P F +  + +  LN TS  R+ T     V 
Sbjct: 63  CCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTAISLSVI 122

Query: 182 VRNPNPRTDVIYDNFEVTLMLAETG--QNLCLGK--IEPFSQWPKTTTTVKA 325
            RNPN     IYD  ++TL  A TG   ++ +GK  I  FS   K TTT+++
Sbjct: 123 ARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRS 174


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