BLASTX nr result
ID: Cephaelis21_contig00038736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00038736
(887 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi... 343 2e-92
emb|CBI26127.3| unnamed protein product [Vitis vinifera] 343 2e-92
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,... 330 2e-88
ref|XP_002879637.1| pentatricopeptide repeat-containing protein ... 321 1e-85
ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2... 318 1e-84
>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 343 bits (881), Expect = 2e-92
Identities = 164/280 (58%), Positives = 208/280 (74%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
FGAVLHACS+LATLG GKM+HG +I GFHAY V NGL+NMYAKCG+I S F +IL
Sbjct: 338 FGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEIL 397
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLLMTCSHSGLVEKGSS 527
DL+SWN MLF LGM+G ++QA +L+E MVASG+KPDKVTF+GLLMTCSHSGL+EKG +
Sbjct: 398 GKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQA 457
Query: 526 IFESMTAVHGIPPDNDHVACMVDMLGRAGRLKEARELTKKYLDLQSDKFSSYEVLFGACS 347
+FESM +V+G+ + +HV CMVD+LGR G L +AREL +Y + S E L GAC
Sbjct: 458 LFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACF 517
Query: 346 GQGNIEMGAELSEQLQILQPKNEMSFVLLSNMYCASGQWKEAEMLRRVMAHQQVKKLPGI 167
+ MGA L E L++ +P+ EMS+VLLSN+YC SGQWKEAEM+R+ M VKK+PG
Sbjct: 518 AHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGC 577
Query: 166 SWIEVKNEMTSFLAGRHLNVYLREFSDVLSILDTEMRYPF 47
SWIEV+N++T F+AG H + Y+ E +L+ L EMR PF
Sbjct: 578 SWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRNPF 617
Score = 57.8 bits (138), Expect = 3e-06
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
F A+++A L G M+HG +I++G+ V N +L+ Y+K G D K+F I
Sbjct: 206 FSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIG 265
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDK--VTFVGLLMTCSHSGLVEKG 533
+ +SWN M+ A G + +AF +F+ L P+K V++ ++ + +G E+
Sbjct: 266 ILTQVSWNAMIDAHMKIGDTHEAFLVFQ------LAPEKNVVSWTSMITGYARNGHGEQA 319
Query: 532 SSIFESMTAVHGIPPD 485
S F M H P D
Sbjct: 320 LSFFVKMMENHIQPDD 335
Score = 56.6 bits (135), Expect = 7e-06
Identities = 34/128 (26%), Positives = 57/128 (44%)
Frame = -2
Query: 799 HAYGYVCNGLLNMYAKCGNIVDSCKIFSDILVGDLISWNIMLFALGMYGLSSQAFQLFET 620
H++ + + AK G I + ++F ++ D ++WN ML + GL QA LF
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 619 MVASGLKPDKVTFVGLLMTCSHSGLVEKGSSIFESMTAVHGIPPDNDHVACMVDMLGRAG 440
M + +PD+ TF L C+ G + +G I + V G ++DM G+
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKI-HAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 439 RLKEAREL 416
AR +
Sbjct: 121 SATSARRV 128
>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 343 bits (881), Expect = 2e-92
Identities = 164/280 (58%), Positives = 208/280 (74%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
FGAVLHACS+LATLG GKM+HG +I GFHAY V NGL+NMYAKCG+I S F +IL
Sbjct: 318 FGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEIL 377
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLLMTCSHSGLVEKGSS 527
DL+SWN MLF LGM+G ++QA +L+E MVASG+KPDKVTF+GLLMTCSHSGL+EKG +
Sbjct: 378 GKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQA 437
Query: 526 IFESMTAVHGIPPDNDHVACMVDMLGRAGRLKEARELTKKYLDLQSDKFSSYEVLFGACS 347
+FESM +V+G+ + +HV CMVD+LGR G L +AREL +Y + S E L GAC
Sbjct: 438 LFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACF 497
Query: 346 GQGNIEMGAELSEQLQILQPKNEMSFVLLSNMYCASGQWKEAEMLRRVMAHQQVKKLPGI 167
+ MGA L E L++ +P+ EMS+VLLSN+YC SGQWKEAEM+R+ M VKK+PG
Sbjct: 498 AHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGC 557
Query: 166 SWIEVKNEMTSFLAGRHLNVYLREFSDVLSILDTEMRYPF 47
SWIEV+N++T F+AG H + Y+ E +L+ L EMR PF
Sbjct: 558 SWIEVRNKVTVFVAGNHSHPYMEELCKILNFLKFEMRNPF 597
Score = 56.6 bits (135), Expect = 7e-06
Identities = 34/128 (26%), Positives = 57/128 (44%)
Frame = -2
Query: 799 HAYGYVCNGLLNMYAKCGNIVDSCKIFSDILVGDLISWNIMLFALGMYGLSSQAFQLFET 620
H++ + + AK G I + ++F ++ D ++WN ML + GL QA LF
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 619 MVASGLKPDKVTFVGLLMTCSHSGLVEKGSSIFESMTAVHGIPPDNDHVACMVDMLGRAG 440
M + +PD+ TF L C+ G + +G I + V G ++DM G+
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKI-HAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 439 RLKEAREL 416
AR +
Sbjct: 121 SATSARRV 128
>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 623
Score = 330 bits (847), Expect = 2e-88
Identities = 159/279 (56%), Positives = 201/279 (72%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
FGAVLHACS+LA LG G+MVHGC I+ GF Y YV NGL+NMYAKCG++ S F DI
Sbjct: 338 FGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDIC 397
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLLMTCSHSGLVEKGSS 527
DL+S+N +LFA G++G +S+A QL+E M+ G KPDK+TF+GLLMTCSHSGL+E+G
Sbjct: 398 AKDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRL 457
Query: 526 IFESMTAVHGIPPDNDHVACMVDMLGRAGRLKEARELTKKYLDLQSDKFSSYEVLFGACS 347
F SM +VHG+ + DHVACMVDMLGR G L EA+EL KKY + SS E L GACS
Sbjct: 458 FFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACS 517
Query: 346 GQGNIEMGAELSEQLQILQPKNEMSFVLLSNMYCASGQWKEAEMLRRVMAHQQVKKLPGI 167
G +EMG L + L+ L+P E+S+VL SN+YC GQWKEAEM+R+ M + +KK+PG
Sbjct: 518 AHGEVEMGTYLGKTLKTLEPNKEISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGC 577
Query: 166 SWIEVKNEMTSFLAGRHLNVYLREFSDVLSILDTEMRYP 50
SWIEV+N++T+F+AG HL Y E L L+ EMR P
Sbjct: 578 SWIEVRNKVTAFVAGNHLYPYTDELYKTLYFLEFEMRSP 616
Score = 56.6 bits (135), Expect = 7e-06
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Frame = -2
Query: 748 GNIVDSCKIFSDILVGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLL 569
G IV + K+F ++ D ++WN M+ + G +A +F M + KPD TF L
Sbjct: 19 GYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATL 78
Query: 568 MTCSHSGLVEKGSSIFESMTAV--HGIPPDNDHVACMVDMLGRAGRLKEARELTKKYLDL 395
C+ +G G+ I + + H P N+ ++DM G+ A ++ K+ D+
Sbjct: 79 SACAGAGSFPFGTKIHALVIILGYHSSLPVNN---SLIDMYGKCFDAFSAGQVFKEMGDI 135
Query: 394 QSDKFSSYEVLFGACSGQGNIEMGAELSEQLQILQPKNEMSFVLLSNMYCASGQWKEAEM 215
+ S L A + G +E SE ++ K E+++ + M G++ E E+
Sbjct: 136 NEVSWCS---LLFAYTNSGRF---SEASEIFNLMPRKFEIAW---NTMIAGLGRYGEIEL 186
Query: 214 LRRVMAHQQVKKLPGISW-----IEVKNEMTSFLAG 122
+ + L W I E FL+G
Sbjct: 187 CLDMFREMRESLLEPDQWTYSALISACTESLEFLSG 222
>ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325476|gb|EFH55896.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 624
Score = 321 bits (823), Expect = 1e-85
Identities = 156/283 (55%), Positives = 204/283 (72%), Gaps = 2/283 (0%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
+GAVLHACS LA LG GKM+HGC+I GF Y YV N L+N+YAKCG+I +S + F DI
Sbjct: 339 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIA 398
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLLMTCSHSGLVEKGSS 527
DL+SWN MLFA G++GL+ QA +L++ M+ASG+KPD VTF+GLL TCSHSGLVEKG +
Sbjct: 399 NKDLVSWNTMLFAFGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCA 458
Query: 526 IFESMTAVHGIPPDNDHVACMVDMLGRAGRLKEARELTKKY--LDLQSDKFSSYEVLFGA 353
IFESM +GIP + DHV CM+DM GR G L EA++L Y L + + SS+E L GA
Sbjct: 459 IFESMVKDYGIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYNSLVINASNNSSWEALLGA 518
Query: 352 CSGQGNIEMGAELSEQLQILQPKNEMSFVLLSNMYCASGQWKEAEMLRRVMAHQQVKKLP 173
CS + E+G E+S+ L+I +P E+SFVLLSN+YC+SG+WKEAE +RR M + ++K P
Sbjct: 519 CSTHWHTELGREVSKVLKIAEPSEELSFVLLSNLYCSSGRWKEAEEVRREMVERGMRKTP 578
Query: 172 GISWIEVKNEMTSFLAGRHLNVYLREFSDVLSILDTEMRYPFT 44
G SWIEV N +++F+ G + L E S+ L+ L EMR P T
Sbjct: 579 GCSWIEVGNRVSTFVVGGSSHPRLEELSETLNCLQHEMRNPET 621
>ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 318 bits (814), Expect = 1e-84
Identities = 160/280 (57%), Positives = 204/280 (72%), Gaps = 1/280 (0%)
Frame = -2
Query: 886 FGAVLHACSTLATLGPGKMVHGCVIQTGFHAYGYVCNGLLNMYAKCGNIVDSCKIFSDIL 707
FGAVLHACS+LA LG G+MVHGCVI+ GFHA+ Y+ NGL+NMYAKCG++ S F+DI
Sbjct: 207 FGAVLHACSSLAILGHGRMVHGCVIRHGFHAHVYIGNGLVNMYAKCGDLEGSNVAFNDIY 266
Query: 706 VGDLISWNIMLFALGMYGLSSQAFQLFETMVASGLKPDKVTFVGLLMTCSHSGLVEKGSS 527
DL+S+N MLFA G++G +QA QL+E MVASG+KPDKVTF+GL +TCSHSGL++KG
Sbjct: 267 EKDLVSFNSMLFAFGLHGKGTQALQLYEDMVASGIKPDKVTFIGLFLTCSHSGLIDKGLE 326
Query: 526 IFESMTAVHGIPPDNDHVACMVDMLGRAGRLKEARELTKKYLDLQSDKFSSYEVLFGACS 347
FESM VHG+ + DHVACMVDMLGR G L EA+EL K+ K SS E L GACS
Sbjct: 327 FFESMRLVHGLSFNMDHVACMVDMLGRGGYLAEAKELAIKHSKTGDVKTSSCEPLLGACS 386
Query: 346 GQGNIEMGAELSEQLQILQPKNEMS-FVLLSNMYCASGQWKEAEMLRRVMAHQQVKKLPG 170
G +E G + E L+ L+P E S +VL SN+YCASG+WKEAEM+R+ M + +KK+PG
Sbjct: 387 THGEVETGTNVGETLKDLEPHKETSYYVLRSNLYCASGRWKEAEMVRKEMVDEGLKKIPG 446
Query: 169 ISWIEVKNEMTSFLAGRHLNVYLREFSDVLSILDTEMRYP 50
SWIEV N++T+F+AG+ + E L L+ EMR+P
Sbjct: 447 CSWIEVGNKVTAFVAGQS-QPCMEELYTTLHFLELEMRHP 485