BLASTX nr result

ID: Cephaelis21_contig00038684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038684
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Me...    67   1e-09
ref|XP_002279979.2| PREDICTED: LRR receptor-like serine/threonin...    64   1e-08
emb|CAN77668.1| hypothetical protein VITISV_038106 [Vitis vinifera]    64   1e-08
ref|XP_002453694.1| hypothetical protein SORBIDRAFT_04g010690 [S...    64   1e-08
emb|CBI36453.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355518250|gb|AES99873.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1190

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +2

Query: 5   LPHSLSNLTELVELDISYNKIQGSIPETLGRLFNLERLSLGGNRLTGPIPSS 160
           +P ++ NLT+L++L IS NK+ GSIP ++G L NLERLSL  N L+GPIPS+
Sbjct: 426 IPSTIGNLTKLIQLSISENKLSGSIPSSIGNLINLERLSLAQNHLSGPIPST 477


>ref|XP_002279979.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like [Vitis vinifera]
          Length = 1139

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 5   LPHSLSNLTELVELDISYNKIQGSIPETLGRLFNLERLSLGGNRLTGPIPSS 160
           +PHS+ NL  LV L++S N +QG IP +LG++  L+ LSL GN LTGPIPSS
Sbjct: 614 IPHSIGNLVSLVALNLSSNHLQGEIPSSLGKIEGLKYLSLAGNILTGPIPSS 665


>emb|CAN77668.1| hypothetical protein VITISV_038106 [Vitis vinifera]
          Length = 1136

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 5   LPHSLSNLTELVELDISYNKIQGSIPETLGRLFNLERLSLGGNRLTGPIPSS 160
           +PHS+ NL  LV L++S N +QG IP +LG++  L+ LSL GN LTGPIPSS
Sbjct: 611 IPHSIGNLVSLVALNLSSNHLQGEIPSSLGKIEGLKYLSLAGNILTGPIPSS 662


>ref|XP_002453694.1| hypothetical protein SORBIDRAFT_04g010690 [Sorghum bicolor]
           gi|241933525|gb|EES06670.1| hypothetical protein
           SORBIDRAFT_04g010690 [Sorghum bicolor]
          Length = 202

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 5   LPHSLSNLTELVELDISYNKIQGSIPETLGRLFNLERLSLGGNRLTGPIPSS 160
           +P S+ NLTEL  LD+SY K  GSIP+TLG L NL++L L GN  +G IPSS
Sbjct: 54  IPASIGNLTELTSLDLSYGKWNGSIPDTLGMLVNLKKLDLWGNGFSGLIPSS 105


>emb|CBI36453.3| unnamed protein product [Vitis vinifera]
          Length = 737

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = +2

Query: 5   LPHSLSNLTELVEL---DISYNKIQGSIPETLGRLFNLERLSLGGNRLTGPIPSS 160
           +P SL N++ L EL    +SYN+  G IPE +G L NLE L LGGN LTGPIPSS
Sbjct: 146 IPSSLGNISTLEELLFASLSYNRFDGQIPEEIGSLRNLEELYLGGNHLTGPIPSS 200


Top