BLASTX nr result
ID: Cephaelis21_contig00038532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00038532
(771 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) ... 446 e-126
ref|YP_086962.1| photosystem II 44 kDa protein [Panax ginseng] g... 446 e-126
ref|YP_538759.1| photosystem II 44 kDa protein [Glycine max] gi|... 446 e-126
sp|P06413.1|PSBC_TOBAC RecName: Full=Photosystem II CP43 chlorop... 446 e-126
gb|AFU94723.1| PsbC, partial (chloroplast) [Rhizophora mangle] 446 e-126
>ref|YP_007353911.1| photosystem II 44 kDa protein (chloroplast) [Tectona grandis]
gi|438687600|emb|CCP47126.1| photosystem II 44 kDa
protein (chloroplast) [Tectona grandis]
gi|438688284|emb|CCP47215.1| photosystem II 44 kDa
protein (chloroplast) [Tectona grandis]
gi|438688408|emb|CCP47304.1| photosystem II 44 kDa
protein (chloroplast) [Tectona grandis]
Length = 473
Score = 446 bits (1146), Expect(2) = e-126
Identities = 214/218 (98%), Positives = 214/218 (98%)
Frame = +3
Query: 3 YL*KSPFWGEG*IVSADDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 182
YL KSPF GEG IVS DDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY
Sbjct: 212 YLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 271
Query: 183 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 362
LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA
Sbjct: 272 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 331
Query: 363 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 542
QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR
Sbjct: 332 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 391
Query: 543 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 656
SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS
Sbjct: 392 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 429
Score = 34.7 bits (78), Expect(2) = e-126
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 706 RALAAIAGLEKRIDHDFEPVLS 771
RA AA AG EK ID DFEPVLS
Sbjct: 447 RARAAAAGFEKGIDRDFEPVLS 468
>ref|YP_086962.1| photosystem II 44 kDa protein [Panax ginseng]
gi|75254107|sp|Q68S10.1|PSBC_PANGI RecName:
Full=Photosystem II CP43 chlorophyll apoprotein;
AltName: Full=PSII 43 kDa protein; AltName:
Full=Photosystem II 44 kDa reaction center protein;
AltName: Full=Protein CP-43; AltName: Full=Protein P6;
Flags: Precursor gi|51235309|gb|AAT98505.1| PSII 44 kDa
protein [Panax ginseng]
Length = 473
Score = 446 bits (1146), Expect(2) = e-126
Identities = 214/218 (98%), Positives = 214/218 (98%)
Frame = +3
Query: 3 YL*KSPFWGEG*IVSADDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 182
YL KSPF GEG IVS DDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY
Sbjct: 212 YLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 271
Query: 183 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 362
LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA
Sbjct: 272 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 331
Query: 363 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 542
QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR
Sbjct: 332 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 391
Query: 543 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 656
SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS
Sbjct: 392 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 429
Score = 34.7 bits (78), Expect(2) = e-126
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 706 RALAAIAGLEKRIDHDFEPVLS 771
RA AA AG EK ID DFEPVLS
Sbjct: 447 RARAAAAGFEKGIDRDFEPVLS 468
>ref|YP_538759.1| photosystem II 44 kDa protein [Glycine max]
gi|122202497|sp|Q2PMT9.1|PSBC_SOYBN RecName:
Full=Photosystem II CP43 chlorophyll apoprotein;
AltName: Full=PSII 43 kDa protein; AltName:
Full=Photosystem II 44 kDa reaction center protein;
AltName: Full=Protein CP-43; AltName: Full=Protein P6;
Flags: Precursor gi|83595738|gb|ABC25119.1| photosystem
II CP43 chlorophyll apoprotein [Glycine max]
Length = 473
Score = 446 bits (1146), Expect(2) = e-126
Identities = 214/218 (98%), Positives = 214/218 (98%)
Frame = +3
Query: 3 YL*KSPFWGEG*IVSADDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 182
YL KSPF GEG IVS DDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY
Sbjct: 212 YLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 271
Query: 183 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 362
LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA
Sbjct: 272 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 331
Query: 363 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 542
QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR
Sbjct: 332 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 391
Query: 543 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 656
SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS
Sbjct: 392 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 429
Score = 34.7 bits (78), Expect(2) = e-126
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 706 RALAAIAGLEKRIDHDFEPVLS 771
RA AA AG EK ID DFEPVLS
Sbjct: 447 RARAAAAGFEKGIDRDFEPVLS 468
>sp|P06413.1|PSBC_TOBAC RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName:
Full=PSII 43 kDa protein; AltName: Full=Photosystem II
44 kDa reaction center protein; AltName: Full=Protein
CP-43; AltName: Full=Protein P6; Flags: Precursor
gi|225285|prf||1211235W photosystem II 44kD protein
Length = 473
Score = 446 bits (1146), Expect(2) = e-126
Identities = 214/218 (98%), Positives = 214/218 (98%)
Frame = +3
Query: 3 YL*KSPFWGEG*IVSADDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 182
YL KSPF GEG IVS DDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY
Sbjct: 212 YLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 271
Query: 183 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 362
LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA
Sbjct: 272 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 331
Query: 363 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 542
QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR
Sbjct: 332 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 391
Query: 543 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 656
SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS
Sbjct: 392 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 429
Score = 34.7 bits (78), Expect(2) = e-126
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 706 RALAAIAGLEKRIDHDFEPVLS 771
RA AA AG EK ID DFEPVLS
Sbjct: 447 RARAAAAGFEKGIDRDFEPVLS 468
>gb|AFU94723.1| PsbC, partial (chloroplast) [Rhizophora mangle]
Length = 473
Score = 446 bits (1146), Expect(2) = e-126
Identities = 214/218 (98%), Positives = 214/218 (98%)
Frame = +3
Query: 3 YL*KSPFWGEG*IVSADDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 182
YL KSPF GEG IVS DDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY
Sbjct: 212 YLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAY 271
Query: 183 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 362
LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA
Sbjct: 272 LSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSA 331
Query: 363 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 542
QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR
Sbjct: 332 QGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERR 391
Query: 543 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 656
SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS
Sbjct: 392 SAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATS 429
Score = 34.7 bits (78), Expect(2) = e-126
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1
Query: 706 RALAAIAGLEKRIDHDFEPVLS 771
RA AA AG EK ID DFEPVLS
Sbjct: 447 RARAAAAGFEKGIDRDFEPVLS 468