BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038476
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   117   2e-24
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   115   3e-24
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...   113   2e-23
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   113   2e-23
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             110   1e-22

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  117 bits (292), Expect = 2e-24
 Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = -3

Query: 544 QVCERIKQCRISILKLKAAHKMNSHVAISNIKKRMELLQSEGGSRNWEEWHMLQQNLVVE 365
           Q  E++  CR +I K + +        I ++K  +++ Q +   R+ EE   L   L   
Sbjct: 54  QFVEKLTNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDD-DRSREEITELTLRLKEA 112

Query: 364 YKKEETYWHQKSRIAWLKEGDQNTKFFHALTMQRRRVNSIERLVNNQGFECTTRSLIDQE 185
           Y+ EE YW+QKSR  W+K GD N+KFFHALT QRR  N I  L +  G      S+ D +
Sbjct: 113 YRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGI----WSIEDDD 168

Query: 184 IQ----SSFNTLFSSSNPHNWEAALTGIPRSITRAMNQRLTRPVDDIEIKKALFSMHPHK 17
           IQ    S F  LF+++NP  ++ AL  +   IT  +N  LT    + E++ ALF +HP K
Sbjct: 169 IQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEK 228

Query: 16  APGPD 2
           APGPD
Sbjct: 229 APGPD 233


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/178 (34%), Positives = 98/178 (55%)
 Frame = -3

Query: 535 ERIKQCRISILKLKAAHKMNSHVAISNIKKRMELLQSEGGSRNWEEWHMLQQNLVVEYKK 356
           E+I  CR  I K K   K +S V I  ++ +++    +       E   L++ L  EY  
Sbjct: 273 EKIASCRREISKWKRVSKPSSAVRIQELQFKLDAATKQIPFDR-RELARLKKELSQEYNN 331

Query: 355 EETYWHQKSRIAWLKEGDQNTKFFHALTMQRRRVNSIERLVNNQGFECTTRSLIDQEIQS 176
           EE +W +KSRI W++ GD+NTK+FHA T  RR  N I++L++ +G E T+   + +  ++
Sbjct: 332 EEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEA 391

Query: 175 SFNTLFSSSNPHNWEAALTGIPRSITRAMNQRLTRPVDDIEIKKALFSMHPHKAPGPD 2
            F  LF+S +       L  +   ++  MN  L  P+   E+++A FS++PHK PGPD
Sbjct: 392 YFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPD 449


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
 Frame = -3

Query: 451 KKRMELLQSEGGSRNW---EEWHMLQQNLVVEYKKEETYWHQKSRIAWLKEGDQNTKFFH 281
           KKR+E L+++  SRN    EE  ++ + +++ Y+ EE  W Q+SRI WL EGD NTKFFH
Sbjct: 309 KKRLEQLRADP-SRNTVSEEEQKIVNRIILLNYQ-EEIMWRQRSRITWLHEGDSNTKFFH 366

Query: 280 ALTMQRRRVNSIERLVNNQGFECTTRSLIDQEIQSSFNTLFSSSNPHNWEAALTGIPRSI 101
               +RR  N I++L    G ECT    + Q +   +  LF S    N    L  IPR +
Sbjct: 367 QRASRRRIRNRIDKLNRPDGSECTNVDELHQMVVDFYRNLFESEGTSNMNLVLDHIPRKV 426

Query: 100 TRAMNQRLTRPVDDIEIKKALFSMHPHKAPGPD 2
           T  MN  L  P ++ E+K ALF M P K+PGPD
Sbjct: 427 TDDMNLFLCAPFNETEVKNALFQMFPTKSPGPD 459


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
 Frame = -3

Query: 505  LKLKAAHKM-NSHVAISNIKKRMELLQSEGGSRNWEEWHMLQQNLVVEYKKEETYWHQKS 329
            LK+ +  K  N  V ++++   +E L          + ++L   +   + ++E YWHQ+S
Sbjct: 890  LKMWSKEKFSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRS 949

Query: 328  RIAWLKEGDQNTKFFHALTMQRRRVNSIERLVNNQGFECTTRSLIDQEIQSSFNTLFSSS 149
            R+ WLK GDQN+ FFH  T+QRR+ N I RL ++ G    + + +  +    F  L+ S+
Sbjct: 950  RVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSN 1009

Query: 148  NPHNWEAALTGIPRSITRAMNQRLTRPVDDIEIKKALFSMHPHKAPGPD 2
             P  WE  L  +  ++T  MN+ L+ PV  +E+KKA+F +   KAPGPD
Sbjct: 1010 GPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPD 1058


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  110 bits (276), Expect = 1e-22
 Identities = 62/180 (34%), Positives = 101/180 (56%)
 Frame = -3

Query: 541 VCERIKQCRISILKLKAAHKMNSHVAISNIKKRMELLQSEGGSRNWEEWHMLQQNLVVEY 362
           V +R++ CR S+   K  + +NS   I+ ++  +E  QS      ++   +L+++L   Y
Sbjct: 234 VADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPI-FQRVSVLKKDLAKAY 292

Query: 361 KKEETYWHQKSRIAWLKEGDQNTKFFHALTMQRRRVNSIERLVNNQGFECTTRSLIDQEI 182
           ++EE YW QKSR  WL+ G++N+K+FHA   Q R+   IE+L +  G   T+ +   +  
Sbjct: 293 REEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVA 352

Query: 181 QSSFNTLFSSSNPHNWEAALTGIPRSITRAMNQRLTRPVDDIEIKKALFSMHPHKAPGPD 2
            + F  LF SSNP  +    +G+   ++  MN+ L   V   EIK+A+FS+ P  APGPD
Sbjct: 353 AAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPD 412