BLASTX nr result

ID: Cephaelis21_contig00038460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038460
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              102   4e-20
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   102   4e-20
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...    91   7e-17
ref|XP_004152311.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/84 (66%), Positives = 64/84 (76%)
 Frame = +1

Query: 151 PNSPVPFTLKITCGLRKIGPRKPLWRSRVLSPEAIRAVHSLKLAKSPDKLADVFRSTISR 330
           P +  P   KI CGLR  GPRKPLWRSRVLS EAI+ V SLKLAKS  KL +VF S +SR
Sbjct: 17  PQTHKPQFPKIACGLRG-GPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKLEEVFSSRVSR 75

Query: 331 LLKADLLDALSELQRQNELELALQ 402
           LLK+DLLD L+ELQRQ EL+L L+
Sbjct: 76  LLKSDLLDTLAELQRQGELDLTLK 99


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/84 (66%), Positives = 64/84 (76%)
 Frame = +1

Query: 151 PNSPVPFTLKITCGLRKIGPRKPLWRSRVLSPEAIRAVHSLKLAKSPDKLADVFRSTISR 330
           P +  P   KI CGLR  GPRKPLWRSRVLS EAI+ V SLKLAKS  KL +VF S +SR
Sbjct: 22  PQTHKPQFPKIACGLRG-GPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKLEEVFSSRVSR 80

Query: 331 LLKADLLDALSELQRQNELELALQ 402
           LLK+DLLD L+ELQRQ EL+L L+
Sbjct: 81  LLKSDLLDTLAELQRQGELDLTLK 104


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/84 (66%), Positives = 64/84 (76%)
 Frame = +1

Query: 151 PNSPVPFTLKITCGLRKIGPRKPLWRSRVLSPEAIRAVHSLKLAKSPDKLADVFRSTISR 330
           P +  P   KI CGLR  GPRKPLWRSRVLS EAI+ V SLKLAKS  KL +VF S +SR
Sbjct: 17  PQTHKPQFPKIACGLRG-GPRKPLWRSRVLSTEAIQVVQSLKLAKSSIKLEEVFSSRVSR 75

Query: 331 LLKADLLDALSELQRQNELELALQ 402
           LLK+DLLD L+ELQRQ EL+L L+
Sbjct: 76  LLKSDLLDTLAELQRQGELDLTLK 99


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = +1

Query: 127 PPKFKIC-LPNSPVPFTLKITCGLRKIGPRKPLWRSRVLSPEAIRAVHSLKLAKSPD-KL 300
           PP  +I  +P +P   T  +TC LR  GPRKPLWRS+ +S EAI+A+ SLKLAKS + +L
Sbjct: 11  PPPLRIFQIPKTPNFKTSFVTCSLRG-GPRKPLWRSKRVSTEAIQAIQSLKLAKSSNPRL 69

Query: 301 ADVFRSTISRLLKADLLDALSELQRQNELELALQ 402
             VF + +SRLLK DLLD L  LQ+QNEL+LAL+
Sbjct: 70  HQVFNTKLSRLLKTDLLDVLEILQKQNELDLALK 103


>ref|XP_004152311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449484870|ref|XP_004157003.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 245

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/86 (62%), Positives = 61/86 (70%)
 Frame = +1

Query: 145 CLPNSPVPFTLKITCGLRKIGPRKPLWRSRVLSPEAIRAVHSLKLAKSPDKLADVFRSTI 324
           C   +P P    I CGLRK G  +PL  SRV S EAI+AV SLKLAKS  K+ DV  + +
Sbjct: 29  CGTAAPPP---NIICGLRK-GSNRPLGLSRVPSNEAIQAVQSLKLAKSTSKMEDVINTKL 84

Query: 325 SRLLKADLLDALSELQRQNELELALQ 402
            RLLKADL DALSELQRQNELEL+LQ
Sbjct: 85  GRLLKADLFDALSELQRQNELELSLQ 110


Top