BLASTX nr result

ID: Cephaelis21_contig00038425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038425
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript...    58   7e-07

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = -1

Query: 255 LIQMIKDSIQPDLSTQDKAKCTAHPSGTFSVKSAVLVFRQQKQQVMWPDLIWYKGYVPRF 76
           +I+ I  +  P +  +D+      P+  FSVK A    R+ +Q V W D++W+K  VPR 
Sbjct: 296 IIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRH 355

Query: 75  TFISWLLC*GRLNTKDRLCKWGI 7
           +F+ W+    +L T+D+L ++GI
Sbjct: 356 SFLLWMAVQQKLTTQDKLHRFGI 378


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/83 (33%), Positives = 49/83 (59%)
 Frame = -1

Query: 255  LIQMIKDSIQPDLSTQDKAKCTAHPSGTFSVKSAVLVFRQQKQQVMWPDLIWYKGYVPRF 76
            +I+ I  +  P +  +D+      P+  FSVK A    R+ +Q V W D++W+K  VPR 
Sbjct: 829  IIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRH 888

Query: 75   TFISWLLC*GRLNTKDRLCKWGI 7
            +F+ W++   +L T+D+L ++GI
Sbjct: 889  SFLLWMVVQQKLTTQDKLHRFGI 911


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/83 (32%), Positives = 48/83 (57%)
 Frame = -1

Query: 255 LIQMIKDSIQPDLSTQDKAKCTAHPSGTFSVKSAVLVFRQQKQQVMWPDLIWYKGYVPRF 76
           +I+ I  +  P +  +D+      P+  FSVK A    R+ +  V W D++W+K  VPR 
Sbjct: 114 IIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRH 173

Query: 75  TFISWLLC*GRLNTKDRLCKWGI 7
           +F+ W++   +L T+D+L ++GI
Sbjct: 174 SFLLWMVVQQKLTTQDKLHRFGI 196


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/83 (32%), Positives = 47/83 (56%)
 Frame = -1

Query: 255  LIQMIKDSIQPDLSTQDKAKCTAHPSGTFSVKSAVLVFRQQKQQVMWPDLIWYKGYVPRF 76
            +I+ I  +  P +  +D+      P+  F VK A    R+ +Q V W D++W+K  VPR 
Sbjct: 1169 IIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRH 1228

Query: 75   TFISWLLC*GRLNTKDRLCKWGI 7
            +F+ W+    +L T+D+L ++GI
Sbjct: 1229 SFLLWMAVQQKLTTQDKLYRFGI 1251


>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 320

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/61 (39%), Positives = 34/61 (55%)
 Frame = -1

Query: 183 PSGTFSVKSAVLVFRQQKQQVMWPDLIWYKGYVPRFTFISWLLC*GRLNTKDRLCKWGIS 4
           PS  FS     L    Q   V W   +W+K +VP+  FI W++   RL+T+DRL  WG+S
Sbjct: 129 PSNIFSTAKTSLALHPQNHIVPWYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLS 188

Query: 3   V 1
           +
Sbjct: 189 I 189