BLASTX nr result

ID: Cephaelis21_contig00038359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038359
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   118   4e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   118   6e-25
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...   117   8e-25
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   117   1e-24
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   117   1e-24

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  118 bits (296), Expect = 4e-25
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +3

Query: 18  AVHKTKGTLDYIHSDLWGPSRVPSKGGARYMLTFIDDYSRKVWVYFLKQKSDVFLTFKQW 197
           A+H+T+  LDYIHSDLWGPSRVPS GGARY LT IDDYSRKVW+YFLK KS+ FL FK+W
Sbjct: 442 AIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEW 501

Query: 198 KVLIEKQT 221
           K+L+E QT
Sbjct: 502 KILVETQT 509


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +3

Query: 18  AVHKTKGTLDYIHSDLWGPSRVPSKGGARYMLTFIDDYSRKVWVYFLKQKSDVFLTFKQW 197
           +VH+TKG LDY+H+DLWGPSR PS GGARYMLT IDDYSRKVW YFLK K D F  FK+W
Sbjct: 477 SVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEW 536

Query: 198 KVLIEKQT 221
           KV+IE+QT
Sbjct: 537 KVMIERQT 544


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score =  117 bits (294), Expect = 8e-25
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +3

Query: 18  AVHKTKGTLDYIHSDLWGPSRVPSKGGARYMLTFIDDYSRKVWVYFLKQKSDVFLTFKQW 197
           +VH+TKG LDY+H+DLWGPSR PS GGARYMLT IDDYS KVW YFLK K D F TFK+W
Sbjct: 427 SVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSTKVWPYFLKHKDDTFATFKEW 486

Query: 198 KVLIEKQT 221
           KV+IE+QT
Sbjct: 487 KVMIERQT 494


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = +3

Query: 18  AVHKTKGTLDYIHSDLWGPSRVPSKGGARYMLTFIDDYSRKVWVYFLKQKSDVFLTFKQW 197
           +VH TKGTLDY+H+DLWGPS+ PS GGARYMLT IDDYSRKVW YFLK K D F  FK W
Sbjct: 476 SVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNW 535

Query: 198 KVLIEKQT 221
           KV+IE+QT
Sbjct: 536 KVMIERQT 543


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = +3

Query: 18  AVHKTKGTLDYIHSDLWGPSRVPSKGGARYMLTFIDDYSRKVWVYFLKQKSDVFLTFKQW 197
           +VH TKGTLDY+H+DLWGPS+ PS GGARYMLT IDDYSRKVW YFLK K D F  FK W
Sbjct: 476 SVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNW 535

Query: 198 KVLIEKQT 221
           KV+IE+QT
Sbjct: 536 KVMIERQT 543


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