BLASTX nr result

ID: Cephaelis21_contig00038295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038295
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    60   4e-07
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = -3

Query: 528 PGFSGAGVVLRDSAGAVTRASAHFLGHTTSMKAEILALYKVLQLYRELGFRMVHL*VDSQ 349
           PG +GAG V+RD  GA     A  +G  +S+ AE+ A+Y  LQL  + GFR V L  DS+
Sbjct: 96  PGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSK 155

Query: 348 LLVDFLTASAGWLWRFFSNL*WIHQYMAAD-GYTLSHVYRQANLVADALVRH 196
           ++V  +   +  + R ++ +  I   +  D   T  HVYR+AN VAD L  +
Sbjct: 156 VVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTYHVYREANCVADWLANY 207


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = -3

Query: 528 PGFSGAGVVLRDSAGAVTRASAHFLGHTTSMKAEILALYKVLQLYRELGFRMVHL*VDSQ 349
           PG +GAG V+RD  GA     A  +G  +S+ AE+ A+Y  LQL  + GFR V L  DS+
Sbjct: 96  PGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSK 155

Query: 348 LLVDFLTASAGWLWRFFSNL*WIHQYMAAD-GYTLSHVYRQANLVADALVRH 196
           ++V  +   +  + R ++ +  I   +  +   T  HVYR+AN VAD L  +
Sbjct: 156 VVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYREANCVADWLANY 207


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
 Frame = -3

Query: 525  GFSGAGVVLRDSAGAVTRASAHFLGHTTSMKAEILALYKVLQLYRELGFRMVHL*VDSQL 346
            G  G G +LR++ G V  A    LG  TS  AE +++   +QL  + G  M+    DS L
Sbjct: 1011 GRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGVNMIIGETDSIL 1070

Query: 345  LVDFLTASAGWLWRFFSNL*WIHQYMAADGYTLSHVYRQANLVADALVRHVSSTRASYVF 166
            L   +T +    WR +  +  I + +   G+ ++H  R+AN  AD L     ST  ++VF
Sbjct: 1071 LAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLASISLSTDVNHVF 1130

Query: 165  -TFSTLPSNIK 136
             +++ LPS +K
Sbjct: 1131 KSYANLPSLVK 1141


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = -3

Query: 528 PGFSGAGVVLRDSAGAVTRASAHFLGHTTSMKAEILALYKVLQLYRELGFRMVHL*VDSQ 349
           PG +GAG V+R+  GA     A  +   +S+ AE+ A+Y  LQL  + GFR V L  DS+
Sbjct: 96  PGVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSK 155

Query: 348 LLVDFLTASAGWLWRFFSNL*WIHQYMAAD-GYTLSHVYRQANLVADALVRH 196
           ++V  +   +  + R ++ +  I   +  D   T  HVYR+AN VAD L  +
Sbjct: 156 VVVGLINGDSVRVDRNYNIIMQIKDMLGRDWEVTTYHVYREANCVADWLANY 207


Top