BLASTX nr result
ID: Cephaelis21_contig00038241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00038241 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 55 8e-06 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 55 8e-06 >ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata] Length = 227 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Frame = +3 Query: 75 GAGRRMDEWKLDDF-----SAIAYKYFRSPRCRVGWAHKVWYFFVPSKYSFTLWLGLRGC 239 G + + + LDD+ S + R + +V W + VW+ +YSF +WL ++ Sbjct: 46 GPDKPLWRYTLDDYDSSFTSRHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQ 105 Query: 240 LLARDRLEYLDIDTFCTFCEMRVESIDHLYFSCFF 344 L R+ ++ C FC R ES DHL+F+C F Sbjct: 106 LSTGTRMRAWGVEQPCVFCRERDESRDHLFFACPF 140 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 129 YKYFRSPRCRVGWAHKVWYFFVPSKYSFTLWLGLRGCLLARDRLEYL--DIDTFCTFCEM 302 + + RS RV W +W+ KYSF WL G L DR+ I T C FC+ Sbjct: 1044 WHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQG 1103 Query: 303 RVESIDHLYFSCFF 344 +E+ DHL+F+C F Sbjct: 1104 TLETRDHLFFTCSF 1117