BLASTX nr result

ID: Cephaelis21_contig00038061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00038061
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    59   4e-07
emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210...    59   5e-07
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          57   2e-06
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    56   3e-06
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   3e-06

>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = -1

Query: 373 MDNKHLLIQFNLQEDYLHLYSRPVWYIKGIPMRIFKWSPKFHVDKE-ISLAPIWIVFP*L 197
           +  +  +++F ++EDY+   +   W + G  + +  WSP+F+  ++ I   P+W+    L
Sbjct: 129 LPRQFFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDVIETTPVWVRVANL 188

Query: 196 PTHLFERITIFSIATLIGFPLRIDLATATLKRPSMAREQIELGLK 62
           P   +    +  IA  +G P+++DL T   +R   AR  +E+ LK
Sbjct: 189 PVTFYHNEILLGIAAGLGKPIKVDLTTLRKERGRFARVCVEVNLK 233


>emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1|
           putative protein [Arabidopsis thaliana]
          Length = 404

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -1

Query: 364 KHLLIQFNLQEDYLHLYSRPVWYIKGIPMRIFKWSPKFH-VDKEISLAPIWIVFP*LPTH 188
           K  +I+F L+E+YL   +   W + G  + +  WSP F  +  +I   P+W+    +P +
Sbjct: 64  KFFMIRFELEEEYLAALTGGPWRVFGNYLMVQDWSPNFDPLRDDIVTTPVWVRLTNIPVN 123

Query: 187 LFERITIFSIATLIGFPLRIDLATATLKRPSMAREQIELGLKK 59
            + R  +  IA  +G  L++DL T T  R   AR  IE+ L K
Sbjct: 124 YYHRCLLEEIARGLGKLLKVDLNTITFGRGRFARVCIEVNLAK 166


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
 Frame = -1

Query: 412 LSLDFKSSYQLGLMDNKHLLIQFNLQEDYLHLYSRPVWYIKG----IPMRIFKWSPKFHV 245
           + L+ K    +G ++ +H+LI+ +L EDY  L S+  W ++      P+R  KW P F+ 
Sbjct: 48  IQLEIKGPCNIGFLEERHILIRLSLLEDYATLMSK-AWELRVRNRYFPLRFLKWDPWFNP 106

Query: 244 DKEISLAPIWIVFP*LPTHL 185
           ++E ++A  WI FP LP  L
Sbjct: 107 EEETTIAIAWISFPGLPLAL 126


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -1

Query: 355 LIQFNLQEDYLHLYSRPVWYIKGIPMRIFKWSPKFH-VDKEISLAPIWIVFP*LPTHLFE 179
           +I+F  +++YL   +   W   G  + +  WSP+F  +  EI+  PIW+    +P  L+ 
Sbjct: 95  MIRFEREDEYLSALTGGPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYH 154

Query: 178 RITIFSIATLIGFPLRIDLATATLKRPSMAREQIELGLKK 59
              +  IA  +G P+++D+ T  ++R   AR  IE+ L K
Sbjct: 155 TSILMGIAGSLGKPVKVDMTTLHVERARFARMCIEVDLAK 194


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = -1

Query: 400 FKSSYQLGLMDNKH--LLIQFNLQEDYLHLYSRPVWYIKGIPMRIFKWSPKFHVDKEI-S 230
           +K++ ++ ++D  H   L +FN   D         W+I    + + +W P F   + +  
Sbjct: 148 WKTNDKVEVIDLGHDVFLFKFNNGNDMEKALFGGPWFILNHYLMLTRWKPDFRPSQSVFD 207

Query: 229 LAPIWIVFP*LPTHLFERITIFSIATLIGFPLRIDLATATLKRPSMAREQIELGLKK 59
              +WI FP LP   +++  +F+IA  +G P+++D AT  + R   AR  IEL L K
Sbjct: 208 KIMVWIRFPELPLEYYDKEALFAIAGKVGKPIKVDYATDHMARGRYARVCIELDLAK 264


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