BLASTX nr result

ID: Cephaelis21_contig00037994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037994
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   141   3e-35
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              141   3e-35
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu...   148   2e-34
ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helica...   128   2e-27
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   127   5e-27

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score =  141 bits (355), Expect(2) = 3e-35
 Identities = 76/147 (51%), Positives = 103/147 (70%)
 Frame = +1

Query: 1    SPDSKVKVIVDRWLAFECKALDVAQIYCLRERLSSAILFKVTNPGKVLPEMLEVSIYAMR 180
            SPD+ V V+VDRW +FE  ALDVAQIYCLRERL++AI FK T+  +VLP ML  S+YA+ 
Sbjct: 1041 SPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGASVYAIA 1100

Query: 181  CILSYDGMSGISLPLRAVDMLTSMVDTTTIGPSATGRRKGIGHTPPNSFVRSLIFGGRNQ 360
            CILSYDG+SGISL L +VD LTSMV+ T I  SA+GRR+ +G   PN+F+++L+  G   
Sbjct: 1101 CILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRR-MGQN-PNNFLKTLMSHGTRH 1158

Query: 361  NSASYYQSVAFSGSQALRNYNTPSNHH 441
             S S +       ++   N+N+P  ++
Sbjct: 1159 KSPSKHHK-----NKGAENWNSPPTYN 1180



 Score = 34.3 bits (77), Expect(2) = 3e-35
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +3

Query: 525  PSVGMNVHHRSSGQGPTIVTHGSAFYGARISREDYSKRQRGNGS 656
            PS+  N   R S Q P+   +GS+ +G    R D  KRQRGNGS
Sbjct: 1188 PSLTSN--QRPSSQRPSFSGYGSSMHGPYGPRGDSFKRQRGNGS 1229


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  141 bits (355), Expect(2) = 3e-35
 Identities = 76/147 (51%), Positives = 103/147 (70%)
 Frame = +1

Query: 1    SPDSKVKVIVDRWLAFECKALDVAQIYCLRERLSSAILFKVTNPGKVLPEMLEVSIYAMR 180
            SPD+ V V+VDRW +FE  ALDVAQIYCLRERL++AI FK T+  +VLP ML  S+YA+ 
Sbjct: 1000 SPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGASVYAIA 1059

Query: 181  CILSYDGMSGISLPLRAVDMLTSMVDTTTIGPSATGRRKGIGHTPPNSFVRSLIFGGRNQ 360
            CILSYDG+SGISL L +VD LTSMV+ T I  SA+GRR+ +G   PN+F+++L+  G   
Sbjct: 1060 CILSYDGLSGISLSLESVDSLTSMVNATEIDNSASGRRR-MGQN-PNNFLKTLMSHGTRH 1117

Query: 361  NSASYYQSVAFSGSQALRNYNTPSNHH 441
             S S +       ++   N+N+P  ++
Sbjct: 1118 KSPSKHHK-----NKGAENWNSPPTYN 1139



 Score = 34.3 bits (77), Expect(2) = 3e-35
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +3

Query: 525  PSVGMNVHHRSSGQGPTIVTHGSAFYGARISREDYSKRQRGNGS 656
            PS+  N   R S Q P+   +GS+ +G    R D  KRQRGNGS
Sbjct: 1147 PSLTSN--QRPSSQRPSFSGYGSSMHGPYGPRGDSFKRQRGNGS 1188


>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1229

 Score =  148 bits (373), Expect(2) = 2e-34
 Identities = 77/150 (51%), Positives = 98/150 (65%)
 Frame = +1

Query: 1    SPDSKVKVIVDRWLAFECKALDVAQIYCLRERLSSAILFKVTNPGKVLPEMLEVSIYAMR 180
            SPD+ V V+VDRWL F   AL+VAQIYCLRERLS+AILF+V +P + LP  L  S+ A  
Sbjct: 1038 SPDNSVNVVVDRWLYFSSTALEVAQIYCLRERLSAAILFRVMHPKQELPPALAASMRATA 1097

Query: 181  CILSYDGMSGISLPLRAVDMLTSMVDTTTIGPSATGRRKGIGHTPPNSFVRSLIFGGRNQ 360
            C+LSYDG SGISLP  +VD L SMVD T I  +A GRRK +GH  P+ F+RSL+   R Q
Sbjct: 1098 CVLSYDGQSGISLPQESVDSLASMVDATEIDSTAPGRRKAMGHN-PSGFLRSLMSNRRQQ 1156

Query: 361  NSASYYQSVAFSGSQALRNYNTPSNHHHRP 450
             +  +Y++      +   N N PS   + P
Sbjct: 1157 TTPHHYRNARLPAFKGKSNINQPSTCKNTP 1186



 Score = 24.6 bits (52), Expect(2) = 2e-34
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 564  QGPTIVTHGSAFYGARISREDYSKRQRGNGS 656
            Q P +  H S   G+   R D SKRQRGN S
Sbjct: 1197 QRPPLQGHTSGKSGSS-PRGDSSKRQRGNAS 1226


>ref|XP_003518495.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine
            max]
          Length = 1162

 Score =  128 bits (321), Expect = 2e-27
 Identities = 66/128 (51%), Positives = 89/128 (69%)
 Frame = +1

Query: 1    SPDSKVKVIVDRWLAFECKALDVAQIYCLRERLSSAILFKVTNPGKVLPEMLEVSIYAMR 180
            SPD+ VKVI+DRWL F   A+DVAQ+YCLRERLS+AIL+KVT+P   LP ++  S++A+ 
Sbjct: 1037 SPDNMVKVIMDRWLYFRSTAIDVAQLYCLRERLSAAILYKVTHPRNTLPPIMAASVHAIA 1096

Query: 181  CILSYDGMSGISLPLRAVDMLTSMVDTTTIGPSATGRRKGIGHTPPNSFVRSLIFGGRNQ 360
            CILS DG  G+S  L  VD LT+MV+ T++G  ATG R+  G  P  S    L + GR Q
Sbjct: 1097 CILSCDGCIGVSAMLEGVDTLTTMVNATSLGKPATGTRR-FGKRPKGSLAELLNYDGR-Q 1154

Query: 361  NSASYYQS 384
            NS  ++++
Sbjct: 1155 NSGPHFKA 1162


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
            predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  127 bits (318), Expect = 5e-27
 Identities = 75/146 (51%), Positives = 90/146 (61%)
 Frame = +1

Query: 1    SPDSKVKVIVDRWLAFECKALDVAQIYCLRERLSSAILFKVTNPGKVLPEMLEVSIYAMR 180
            SPD+ V V+VDRWL F   ALDVAQIYCLRE+LS+AILFKVT+P K LP  L    Y   
Sbjct: 1026 SPDNSVMVVVDRWLYFGATALDVAQIYCLREQLSAAILFKVTHPHKELPPALAAYTYTTA 1085

Query: 181  CILSYDGMSGISLPLRAVDMLTSMVDTTTIGPSATGRRKGIGHTPPNSFVRSLIFGGRNQ 360
            CILS DG+SGISLP  +V+ LTSMV  T I  S +GRR GI    PNSF+ SL      Q
Sbjct: 1086 CILSNDGLSGISLPGESVESLTSMVHATEIDESCSGRR-GISQN-PNSFLSSL--KNNTQ 1141

Query: 361  NSASYYQSVAFSGSQALRNYNTPSNH 438
             +A  Y +      +     +T + H
Sbjct: 1142 QTAPRYHNARSPNQRPTLQGSTSAGH 1167


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