BLASTX nr result

ID: Cephaelis21_contig00037939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037939
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...    66   3e-09
ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|1...    65   4e-09
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...    65   4e-09
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|NP_171986.3| translocon at the inner envelope membrane of ch...    64   2e-08

>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
           gi|302142547|emb|CBI19750.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   GMHFWTAVAVANLLTVLECLRCAVSGKYTEIPMISDAAYVQ 123
           GMHFWTAVA   L TVLEC+RCA++G Y +IP + DAAY+Q
Sbjct: 228 GMHFWTAVAFGYLFTVLECIRCALAGMYADIPFVCDAAYIQ 268


>ref|XP_002307678.1| predicted protein [Populus trichocarpa] gi|118487446|gb|ABK95551.1|
           unknown [Populus trichocarpa]
           gi|222857127|gb|EEE94674.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   GMHFWTAVAVANLLTVLECLRCAVSGKYTEIPMISDAAYVQ 123
           GMHFWTAVA A L TVLEC+RCA++G Y ++P   DAAY+Q
Sbjct: 228 GMHFWTAVAFAYLFTVLECIRCALAGMYADVPFACDAAYIQ 268


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
           unknown [Populus trichocarpa]
           gi|222842476|gb|EEE80023.1| predicted protein [Populus
           trichocarpa]
          Length = 272

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   GMHFWTAVAVANLLTVLECLRCAVSGKYTEIPMISDAAYVQ 123
           GMHFWTAVA A L TVLEC+RCA++G Y ++P   DAAY+Q
Sbjct: 228 GMHFWTAVAFAYLFTVLECIRCALAGMYADVPFACDAAYIQ 268


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
           gi|223551137|gb|EEF52623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   GMHFWTAVAVANLLTVLECLRCAVSGKYTEIPMISDAAYVQ 123
           GMHFWTA+A A L TVLEC+RCA++G Y ++P   DAAY+Q
Sbjct: 232 GMHFWTAIAFAYLFTVLECIRCALAGMYADVPFACDAAYIQ 272


>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
           [Arabidopsis thaliana]
           gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
           Full=Protein TIC 20-I, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
           gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
           thaliana] gi|332189644|gb|AEE27765.1| translocon at the
           inner envelope membrane of chloroplasts 20 [Arabidopsis
           thaliana]
          Length = 274

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   GMHFWTAVAVANLLTVLECLRCAVSGKYTEIPMISDAAYVQ 123
           GMHFWTAVA A L TVLE +RCA++G Y +IP + DAAY+Q
Sbjct: 230 GMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYIQ 270


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