BLASTX nr result

ID: Cephaelis21_contig00037931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037931
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    82   6e-14
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        77   1e-12
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    76   3e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   4e-12
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi...    75   7e-12

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = -2

Query: 310 LPIPVTVIDDVVRLCRSFLWD-----KGKELVAWRDLTLPKVEGGLGIRDLPAWNFALLS 146
           LP+P  VI  +  +CRSFLW        K  VAW  +  PK +GGL + +  +WN A L 
Sbjct: 108 LPLPKGVIRRIEAVCRSFLWTGKSCVTKKSPVAWNKVCAPKNQGGLNVINFQSWNKACLI 167

Query: 145 RPLWNIHSKKDSLWVRWIDHVYLRHGSIWETPFNKEQSPLFKRLLSIR 2
           + LWN++ K+DSLW++W+   Y R   I   P     S + K +L  R
Sbjct: 168 KLLWNLYKKEDSLWIQWVHTYYTRGEDIMTVPIKASCSWIMKGILKQR 215


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
 Frame = -2

Query: 304  IPVTVIDDVVRLCRSFLWDKGKEL-----VAWRDLTLPKVEGGLGIRDLPAWNFALLSRP 140
            +P   I  +  LC  FLW    E      V+W  L LPK EGGLG+R L  WN  L  R 
Sbjct: 824  LPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRL 883

Query: 139  LWNIHSKKDSLWVRWIDHVYLRHGSIWETPFNKEQSPLFKRLLSIR 2
            +W +   KDSLW  W    +L  GS W     +  S  +KRLLS+R
Sbjct: 884  IWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLR 929


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = -2

Query: 304  IPVTVIDDVVRLCRSFLWD-----KGKELVAWRDLTLPKVEGGLGIRDLPAWNFALLSRP 140
            +P   +  + ++C  FLW      +G   V+W++  LPK EGGLG+R+   WN  L  R 
Sbjct: 823  LPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRL 882

Query: 139  LWNIHSKKDSLWVRWIDHVYLRHGSIWETPFNKEQSPLFKRLLSIR 2
            +W + +++DSLWV W     LRH + W        S ++K +L +R
Sbjct: 883  IWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLR 928


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
 Frame = -2

Query: 304  IPVTVIDDVVRLCRSFLWDKGKE-----LVAWRDLTLPKVEGGLGIRDLPAWNFALLSRP 140
            IP ++ID + ++CR+F W + +E      VAW  L LPK EGGLGIR+   +N ALL++ 
Sbjct: 819  IPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQ 878

Query: 139  LWNIHSKKDSLWVRWIDHVYLRHGSIWETPFNKEQSPLFKRLLSIR 2
             W I +K DSL  R I   Y    +  E   +   S   K +LS R
Sbjct: 879  AWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCKSILSAR 924


>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
          Length = 1765

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
 Frame = -2

Query: 313  VLPIPVTVIDDVVRLCRSFLWD-----KGKELVAWRDLTLPKVEGGLGIRDLPAWNFALL 149
            +  +P +VIDD+ +L ++F WD     +     AW  LT PK  GGLG RD   +N ALL
Sbjct: 1264 IFKLPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALL 1323

Query: 148  SRPLWNIHSKKDSLWVRWIDHVYLRHGSIWETPFNKEQSPLFKRL 14
            +R  W + +  DSL  R +   Y  HGS+ +T F    SP ++ +
Sbjct: 1324 ARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSI 1368


Top