BLASTX nr result

ID: Cephaelis21_contig00037917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037917
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-23
emb|CBI39461.3| unnamed protein product [Vitis vinifera]               79   2e-23
ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycin...    73   1e-21
ref|XP_002323526.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-21
ref|XP_003611270.1| Pentatricopeptide repeat-containing protein ...    77   8e-21

>ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 300

 Score = 78.6 bits (192), Expect(3) = 2e-23
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +2

Query: 386 NSPYGPLKMVLTTLEEEQQWHRIIQVIKWMLSKGQGTTMGTYKQLI 523
           N P   LK VL TLE+EQQWHR+IQV+KWMLSKGQGTTMGTY QLI
Sbjct: 118 NFPIASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLI 163



 Score = 43.9 bits (102), Expect(3) = 2e-23
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 313 TLHHLDDSREAIYSDLDAWVAWERKFPL 396
           TL  L DS+EA+Y  LDAWVAWE+ FP+
Sbjct: 94  TLLDLKDSKEAVYGALDAWVAWEQNFPI 121



 Score = 31.6 bits (70), Expect(3) = 2e-23
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 222 HHFPEQDFGALPRPQIGENVSRQDKISLLQHT 317
           +H   +D  ++ + QIGENVSR+DKI+ L  T
Sbjct: 63  YHDSGKDAASVHKHQIGENVSRKDKINFLVTT 94


>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 78.6 bits (192), Expect(3) = 2e-23
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = +2

Query: 386 NSPYGPLKMVLTTLEEEQQWHRIIQVIKWMLSKGQGTTMGTYKQLI 523
           N P   LK VL TLE+EQQWHR+IQV+KWMLSKGQGTTMGTY QLI
Sbjct: 114 NFPIASLKRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLI 159



 Score = 43.9 bits (102), Expect(3) = 2e-23
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 313 TLHHLDDSREAIYSDLDAWVAWERKFPL 396
           TL  L DS+EA+Y  LDAWVAWE+ FP+
Sbjct: 90  TLLDLKDSKEAVYGALDAWVAWEQNFPI 117



 Score = 31.6 bits (70), Expect(3) = 2e-23
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 222 HHFPEQDFGALPRPQIGENVSRQDKISLLQHT 317
           +H   +D  ++ + QIGENVSR+DKI+ L  T
Sbjct: 59  YHDSGKDAASVHKHQIGENVSRKDKINFLVTT 90


>ref|NP_001241921.1| uncharacterized protein LOC100795658 [Glycine max]
           gi|255637229|gb|ACU18945.1| unknown [Glycine max]
          Length = 300

 Score = 73.2 bits (178), Expect(3) = 1e-21
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +2

Query: 386 NSPYGPLKMVLTTLEEEQQWHRIIQVIKWMLSKGQGTTMGTYKQLI 523
           N P   LK +L +LE++QQWHR++QVIKWMLSKGQG TMGTY QLI
Sbjct: 105 NFPIASLKTILISLEKDQQWHRVVQVIKWMLSKGQGMTMGTYGQLI 150



 Score = 46.2 bits (108), Expect(3) = 1e-21
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = +1

Query: 307 FNTLHHLDDSREAIYSDLDAWVAWERKFPL 396
           + TL  L+DS+EA+Y  LDAWVAWE+ FP+
Sbjct: 79  YTTLLELNDSKEAVYGALDAWVAWEQNFPI 108



 Score = 28.5 bits (62), Expect(3) = 1e-21
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 249 ALPRPQIGENVSRQDKISLLQHT 317
           A+PR  IGENVSR+DK   L  T
Sbjct: 59  AVPRNYIGENVSRKDKNKYLYTT 81


>ref|XP_002323526.1| predicted protein [Populus trichocarpa] gi|222868156|gb|EEF05287.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 73.9 bits (180), Expect(3) = 6e-21
 Identities = 33/44 (75%), Positives = 36/44 (81%)
 Frame = +2

Query: 392 PYGPLKMVLTTLEEEQQWHRIIQVIKWMLSKGQGTTMGTYKQLI 523
           P   +K VL  LE+EQQWHRI+QVIKWMLSKGQGTTMGTY Q I
Sbjct: 81  PIASIKQVLIALEKEQQWHRIVQVIKWMLSKGQGTTMGTYAQFI 124



 Score = 44.3 bits (103), Expect(3) = 6e-21
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +1

Query: 313 TLHHLDDSREAIYSDLDAWVAWERKFPL 396
           TL  L+DS++++Y  LDAWVAWE+KFP+
Sbjct: 55  TLLDLNDSKDSVYGALDAWVAWEQKFPI 82



 Score = 27.3 bits (59), Expect(3) = 6e-21
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 RPQIGENVSRQDKISLLQHTPSS 326
           R QIG+NVS++DKI  L  T S+
Sbjct: 17  RNQIGDNVSKKDKIKFLITTVST 39


>ref|XP_003611270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512605|gb|AES94228.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 301

 Score = 77.0 bits (188), Expect(3) = 8e-21
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +2

Query: 386 NSPYGPLKMVLTTLEEEQQWHRIIQVIKWMLSKGQGTTMGTYKQLI 523
           N P G L+ +L  LE+EQQWHRI+QVIKWMLSKGQGTTMGTY QLI
Sbjct: 100 NFPIGSLRNILLCLEKEQQWHRIVQVIKWMLSKGQGTTMGTYGQLI 145



 Score = 42.4 bits (98), Expect(3) = 8e-21
 Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
 Frame = +1

Query: 313 TLHHLDD--SREAIYSDLDAWVAWERKFPL 396
           TL  +DD  S+EAIY  LDAWVAWE+ FP+
Sbjct: 74  TLRDMDDTDSKEAIYGALDAWVAWEQNFPI 103



 Score = 25.8 bits (55), Expect(3) = 8e-21
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 252 LPRPQIGENVSRQDKISLLQHT 317
           +P+  IGENVSR+D+   L  T
Sbjct: 53  IPKHYIGENVSRKDRTKFLLTT 74