BLASTX nr result

ID: Cephaelis21_contig00037875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037875
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   105   5e-32
ref|XP_003523402.1| PREDICTED: putative transcription elongation...   101   2e-30
ref|XP_003526672.1| PREDICTED: putative transcription elongation...    99   1e-29
ref|XP_004148818.1| PREDICTED: putative transcription elongation...    99   2e-29
ref|XP_004162900.1| PREDICTED: putative transcription elongation...    99   2e-29

>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
            gi|223534550|gb|EEF36249.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1045

 Score =  105 bits (263), Expect(2) = 5e-32
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +2

Query: 203  PEILVNIPRHG*DGDIGVVREVLPDGSCRVALGSSGNGEIITALPNEIEVVAPRRSDNIK 382
            P+ILVN+ +   D  IGV+R+VL DGSCRV LG++GNGE ITALPNEIE+V PR+SD IK
Sbjct: 941  PDILVNVRKAADDSAIGVIRDVLADGSCRVVLGANGNGETITALPNEIEIVVPRKSDKIK 1000

Query: 383  IMGGSHRGTNGK 418
            IMGG+HRG  GK
Sbjct: 1001 IMGGAHRGATGK 1012



 Score = 57.0 bits (136), Expect(2) = 5e-32
 Identities = 26/40 (65%), Positives = 28/40 (70%)
 Frame = +1

Query: 46  SPPYANAPSPHLPSAPDGHPPMAPSSAYLSATPGRQPMTP 165
           S  YANAPSP+LPS P G P    S+AYL  TPG QPMTP
Sbjct: 879 SSAYANAPSPYLPSTPGGQPMTPSSAAYLPGTPGGQPMTP 918


>ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1050

 Score =  101 bits (252), Expect(2) = 2e-30
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +2

Query: 203  PEILVNIPRHG*DGDIGVVREVLPDGSCRVALGSSGNGEIITALPNEIEVVAPRRSDNIK 382
            P+ILVN+ R G +  +GV+REVLPDGS RVALGSSGNGE ITALPNE+E V PR+SD IK
Sbjct: 947  PDILVNVHRAG-EESVGVIREVLPDGSYRVALGSSGNGEAITALPNEMEAVVPRKSDKIK 1005

Query: 383  IMGGSHRGTNGK 418
            IMGG+ RG  GK
Sbjct: 1006 IMGGALRGATGK 1017



 Score = 55.8 bits (133), Expect(2) = 2e-30
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = +1

Query: 46   SPPYANAPSPHLPSAPDGHPPMAPSSAYLSATPGRQPMTP 165
            S  YANAPSP+LPS P G P    S++YL  TPG QPMTP
Sbjct: 885  SSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTP 924


>ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1039

 Score = 99.0 bits (245), Expect(2) = 1e-29
 Identities = 50/72 (69%), Positives = 57/72 (79%)
 Frame = +2

Query: 203  PEILVNIPRHG*DGDIGVVREVLPDGSCRVALGSSGNGEIITALPNEIEVVAPRRSDNIK 382
            P+ILVN+ R G +  IGV+RE LPDGS RV LGSSGNGE ITALPNE+E V PR+SD IK
Sbjct: 936  PDILVNVHRAG-EESIGVIREALPDGSYRVGLGSSGNGETITALPNEMEAVVPRKSDKIK 994

Query: 383  IMGGSHRGTNGK 418
            IMGG+ RG  GK
Sbjct: 995  IMGGALRGATGK 1006



 Score = 55.8 bits (133), Expect(2) = 1e-29
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = +1

Query: 46  SPPYANAPSPHLPSAPDGHPPMAPSSAYLSATPGRQPMTP 165
           S  YANAPSP+LPS P G P    S++YL  TPG QPMTP
Sbjct: 874 SSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTP 913


>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Cucumis sativus]
          Length = 1044

 Score = 99.4 bits (246), Expect(2) = 2e-29
 Identities = 47/72 (65%), Positives = 57/72 (79%)
 Frame = +2

Query: 203  PEILVNIPRHG*DGDIGVVREVLPDGSCRVALGSSGNGEIITALPNEIEVVAPRRSDNIK 382
            P+ILVN  R G D  +GV+REVLPDGSCR+ LGSSGNGE +TA  +E+EV+ PR+SD IK
Sbjct: 940  PDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGETVTAPSSEVEVIVPRKSDKIK 999

Query: 383  IMGGSHRGTNGK 418
            IMGG+ RG  GK
Sbjct: 1000 IMGGALRGATGK 1011



 Score = 54.7 bits (130), Expect(2) = 2e-29
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +1

Query: 55  YANAPSPHLPSAPDGHPPMAPSSAYLSATPGRQPMTP 165
           YANAPSP+LPS P G P    S++YL  TPG QPMTP
Sbjct: 881 YANAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 917


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 849

 Score = 99.4 bits (246), Expect(2) = 2e-29
 Identities = 47/72 (65%), Positives = 57/72 (79%)
 Frame = +2

Query: 203 PEILVNIPRHG*DGDIGVVREVLPDGSCRVALGSSGNGEIITALPNEIEVVAPRRSDNIK 382
           P+ILVN  R G D  +GV+REVLPDGSCR+ LGSSGNGE +TA  +E+EV+ PR+SD IK
Sbjct: 745 PDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGETVTAPSSEVEVIVPRKSDKIK 804

Query: 383 IMGGSHRGTNGK 418
           IMGG+ RG  GK
Sbjct: 805 IMGGALRGATGK 816



 Score = 54.7 bits (130), Expect(2) = 2e-29
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = +1

Query: 55  YANAPSPHLPSAPDGHPPMAPSSAYLSATPGRQPMTP 165
           YANAPSP+LPS P G P    S++YL  TPG QPMTP
Sbjct: 686 YANAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 722


Top