BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037793
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    74   2e-11
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...    73   3e-11
gb|AAM94933.1| putative GAG-POL precursor [Oryza sativa Japonica...    72   6e-11
gb|ABB47864.2| retrotransposon protein, putative, unclassified [...    72   6e-11
gb|AAM95684.1| putative GAG-POL precursor [Oryza sativa Japonica...    72   6e-11

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/130 (31%), Positives = 71/130 (54%)
 Frame = -3

Query: 395 VHKRLRADETITFLEADEVPSSSPHTDAVIVSAVIAHKKIGRVHVDQGSAVNIIYGDCFR 216
           +HKR + D+ ITF E++      PH DA+++   + + ++  + VD GS+V++++ D F+
Sbjct: 37  LHKRQKPDDGITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFK 96

Query: 215 KMDIDCAALKPALMPLSGFAIDTVWPIRVVDLLITVSEEDDGTTEPKYVTLISEFYVVDV 36
           +     + L+    PL+GFA DT + I  + L           T  + V  ++ F VVD 
Sbjct: 97  RTGHLDSKLQGRKTPLTGFAGDTTFSIGTIQL----------PTIARGVRQLTNFLVVDK 146

Query: 35  DSPYNVILGR 6
            +P+N ILGR
Sbjct: 147 KAPFNAILGR 156


>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
           [Sorghum bicolor]
          Length = 1877

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 51/151 (33%), Positives = 75/151 (49%)
 Frame = -3

Query: 458 NNVASHNAVKAINRSIPPEEPVHKRLRADETITFLEADEVPSSSPHTDAVIVSAVIAHKK 279
           NNVA    V+  + S  P             ITF E D    S PHTDA++++  +A   
Sbjct: 602 NNVAVQGPVRCTDWSRTP-------------ITFTEEDLRLESYPHTDALVITTNVAGWG 648

Query: 278 IGRVHVDQGSAVNIIYGDCFRKMDIDCAALKPALMPLSGFAIDTVWPIRVVDLLITVSEE 99
           + R+ VD GS+ +II+   F +M +  + L+P+  PL GF    +  +  V L ++    
Sbjct: 649 VSRILVDSGSSADIIFAGTFDQMKLSRSQLQPSESPLIGFGGKQIHALGKVALPVSFGTT 708

Query: 98  DDGTTEPKYVTLISEFYVVDVDSPYNVILGR 6
           ++  TE  YVT    F VVD+  PYN I GR
Sbjct: 709 ENARTE--YVT----FDVVDLHYPYNAIFGR 733


>gb|AAM94933.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
          Length = 1850

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
 Frame = -3

Query: 506 GNQHVTGHINTIFGGFNNVASHNAVKAINRSIPPEEPVHKRLR----ADETITFLEADEV 339
           G Q     + T+ GG    AS  ++KA+ R +    P H+  R    ++  +TF + D  
Sbjct: 412 GFQEPEATVATVDGGACAHASRRSLKAMKRELLAVAPTHEATRRARWSEVALTFDQTDHP 471

Query: 338 PSSSPHTD-AVIVSAVIAHKKIGRVHVDQGSAVNIIYGDCFRKMDIDCAALKPALMPLSG 162
           P  +     A++VS  + + K+GRV +D G+A+NI+    F  +      L+P+  P+ G
Sbjct: 472 PCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRPS-QPIIG 530

Query: 161 FAIDTVWPIRVVDLLITVSEEDDGTTEPKYVTLISEFYVVDVDSPYNVILGR 6
                 WP+  +DLL+T     +  TE         F V D+  PYN +LGR
Sbjct: 531 VTPGHTWPLGHIDLLVTFGGSANFRTER------VNFDVADLSLPYNAVLGR 576


>gb|ABB47864.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1733

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
 Frame = -3

Query: 506 GNQHVTGHINTIFGGFNNVASHNAVKAINRSIPPEEPVHKRLR----ADETITFLEADEV 339
           G Q     + T+ GG    AS  ++KA+ R +    P H+  R    ++  +TF + D  
Sbjct: 256 GFQEPEATVATVDGGACAHASRRSLKAMKRELLAVAPTHEATRRARWSEVALTFDQTDHP 315

Query: 338 PSSSPHTD-AVIVSAVIAHKKIGRVHVDQGSAVNIIYGDCFRKMDIDCAALKPALMPLSG 162
           P  +     A++VS  + + K+GRV +D G+A+NI+    F  +      L+P+  P+ G
Sbjct: 316 PCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRPS-QPIIG 374

Query: 161 FAIDTVWPIRVVDLLITVSEEDDGTTEPKYVTLISEFYVVDVDSPYNVILGR 6
                 WP+  +DLL+T     +  TE         F V D+  PYN +LGR
Sbjct: 375 VTPGHTWPLGHIDLLVTFGGSANFRTER------VNFDVADLSLPYNAVLGR 420


>gb|AAM95684.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
          Length = 1740

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
 Frame = -3

Query: 506 GNQHVTGHINTIFGGFNNVASHNAVKAINRSIPPEEPVHKRLR----ADETITFLEADEV 339
           G Q     + T+ GG    AS  ++KA+ R +    P H+  R    ++  +TF + D  
Sbjct: 256 GFQEPEATVATVDGGACAHASRRSLKAMKRELLAVAPTHEATRRARWSEVALTFDQTDHP 315

Query: 338 PSSSPHTD-AVIVSAVIAHKKIGRVHVDQGSAVNIIYGDCFRKMDIDCAALKPALMPLSG 162
           P  +     A++VS  + + K+GRV +D G+A+NI+    F  +      L+P+  P+ G
Sbjct: 316 PCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAFDAIKAPGMVLRPS-QPIIG 374

Query: 161 FAIDTVWPIRVVDLLITVSEEDDGTTEPKYVTLISEFYVVDVDSPYNVILGR 6
                 WP+  +DLL+T     +  TE         F V D+  PYN +LGR
Sbjct: 375 VTPGHTWPLGHIDLLVTFGGSANFRTER------VNFDVADLSLPYNAVLGR 420