BLASTX nr result

ID: Cephaelis21_contig00037750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037750
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    79   9e-13
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    72   6e-11
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    72   6e-11
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta...    72   6e-11
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    68   2e-09

>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/76 (47%), Positives = 54/76 (71%)
 Frame = -2

Query: 239 VEWDFIGAIMVNKDFHLKFIDWETLCLSSASFSININGELRGYTSPIREIR*GD*ILP*L 60
           + WD++ AIM+   F  K+++W  LC+S  S+S+++NGEL G   P RE+R GD + P L
Sbjct: 205 IRWDYLKAIMLRMGFDSKWMEWIILCVSIVSYSVSVNGELVGPFYPGRELRQGDPLSPYL 264

Query: 59  FLICTESLSNLIKQSQ 12
           F+IC E LS+LIKQ++
Sbjct: 265 FIICAEGLSSLIKQAE 280


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/76 (43%), Positives = 49/76 (64%)
 Frame = -2

Query: 239 VEWDFIGAIMVNKDFHLKFIDWETLCLSSASFSININGELRGYTSPIREIR*GD*ILP*L 60
           VEW F+ A+M+   F  K++DW   C+SS S+ I +NG  +G+  P R IR GD I P L
Sbjct: 165 VEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFL 224

Query: 59  FLICTESLSNLIKQSQ 12
           F++CTE+L   +K ++
Sbjct: 225 FILCTEALVAKLKDAE 240


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/76 (43%), Positives = 49/76 (64%)
 Frame = -2

Query: 239 VEWDFIGAIMVNKDFHLKFIDWETLCLSSASFSININGELRGYTSPIREIR*GD*ILP*L 60
           VEW F+ A+M+   F  K++DW   C+SS S+ I +NG  +G+  P R IR GD I P L
Sbjct: 531 VEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFL 590

Query: 59  FLICTESLSNLIKQSQ 12
           F++CTE+L   +K ++
Sbjct: 591 FILCTEALVAKLKDAE 606


>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1044

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/92 (36%), Positives = 53/92 (57%)
 Frame = -2

Query: 284 CLFCLLVNNCT*HHLVEWDFIGAIMVNKDFHLKFIDWETLCLSSASFSININGELRGYTS 105
           C   +  N    +  +EWDFI  +M    FH  +I W   C+++ S+S  +NG  +G  +
Sbjct: 395 CFMAVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQGAVT 454

Query: 104 PIREIR*GD*ILP*LFLICTESLSNLIKQSQL 9
           P R +R GD + P LF+IC+E LS L +++QL
Sbjct: 455 PERGLRQGDPLSPFLFIICSEVLSGLCRKAQL 486


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = -2

Query: 239 VEWDFIGAIMVNKDFHLKFIDWETLCLSSASFSININGELRGYTSPIREIR*GD*ILP*L 60
           VEWDF+  ++    FH  +IDW   C++S S+S  ING  +G   P R +R GD + P L
Sbjct: 479 VEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCL 538

Query: 59  FLICTESLSNLIKQSQ 12
           F++CTE LS L  ++Q
Sbjct: 539 FILCTEVLSGLCTRAQ 554


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