BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037688
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    91   2e-16
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    91   2e-16
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    91   3e-16
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    90   4e-16
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    90   5e-16

>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
 Frame = +3

Query: 3    FPNALVNHIPKQSADHCMLVFEDKP*IEHSKPRFCFDRSLLELPEVEKVVRESW--NKSQ 176
            FP A +  +    +DH  ++             F FD  L+++P  +++V+ SW  N++ 
Sbjct: 588  FPYAEIEFLDFTGSDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRNS 647

Query: 177  LGTPMFQVVQRIKTCXXXXXXXXXXXXMNSAAIILVIKRELESMQDEGGQRNWC*WNRLQ 356
              TP   + +RI +C            +NS   I  ++  L    +   + +     +LQ
Sbjct: 648  RSTP---ITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQ 704

Query: 357  ERLGEKYKEEELYWCQKFRVQWLKEDDMNTKFFHVYTVQRRWKNCIDGLVDDQGLECTKP 536
            E L + + +EE+YW QK R QW+KE D NT +FH  T  R  +N ++ ++DDQG   T  
Sbjct: 705  ESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGD 764

Query: 537  EQIEAGLTASYRQLFSSSFSLGWEKALEGLSRPITSSMNHRLVRLVDDSEI 689
            ++I       +  +FS++               +T+++N  L +   D+EI
Sbjct: 765  KEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEI 815


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 58/230 (25%), Positives = 101/230 (43%)
 Frame = +3

Query: 6    PNALVNHIPKQSADHCMLVFEDKP*IEHSKPRFCFDRSLLELPEVEKVVRESWNKSQLGT 185
            PN  + H+PK  +DH  L+ +  P + +    F F++      E   V++ SW  +  G+
Sbjct: 815  PNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGS 874

Query: 186  PMFQVVQRIKTCXXXXXXXXXXXXMNSAAIILVIKRELESMQDEGGQRNWC*WNRLQERL 365
             M    + + +C             N +  +  +  ++E +            N L +++
Sbjct: 875  AMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQV 934

Query: 366  GEKYKEEELYWCQKFRVQWLKEDDMNTKFFHVYTVQRRWKNCIDGLVDDQGLECTKPEQI 545
             + + ++E+YW Q+ RV WLK  D N+ FFH  T+QRR  N I  L DD G        +
Sbjct: 935  TKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADV 994

Query: 546  EAGLTASYRQLFSSSFSLGWEKALEGLSRPITSSMNHRLVRLVDDSEISK 695
                   +  L+ S+    WE+ L+ +   +T+ MN  L   V   E+ K
Sbjct: 995  ALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKK 1044


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
 Frame = +3

Query: 3   FPNALVNHIPKQSADHCMLV-FEDKP*IEHSKPRFCFDRSLLELPEVEKVVRESWNKSQL 179
           FP +   ++  + +DH  LV +   P ++ SKP F FDR L E  E+  +V+E W  ++ 
Sbjct: 151 FPMSKCEYLRFEGSDHRPLVTYFGAPPLKRSKP-FRFDRRLREKEEIRALVKEVWELARQ 209

Query: 180 GTPMFQVVQRIKTCXXXXXXXXXXXXMNSAAIILVIKRELESMQDEGGQRNWC*WNRLQE 359
            +    V+ +I  C             NSA  I   ++ LES             +  QE
Sbjct: 210 DS----VLYKISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIPDPSLIGSITQE 265

Query: 360 RLGEKYKEEELYWCQKFRVQWLKEDDMNTKFFHVYTVQRRWKNCIDGLVDDQGLECTKPE 539
            L   Y++EEL+W Q  RVQWL   D N  +FH  T  RR  N +  + D  G E  + E
Sbjct: 266 -LEAAYRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEE 324

Query: 540 QIEAGLTASYRQLFSSSFSLGWEKALEGLSRPITSSMNHRLVRLVDDSEISK 695
           QI + +++ ++ +F++S +   +   E LS  I+S  N  L+++    EI +
Sbjct: 325 QIASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKE 376


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
 Frame = +3

Query: 3    FPNALVNHIPKQSADHCMLVFEDKP*IEHSKPRFCFDRSLLELPEVEKVVRESW--NKSQ 176
            FP A    +    +DH  ++             F FD  L+++P  +++V+ SW  N++ 
Sbjct: 362  FPYAETEFLDFTGSDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRNS 421

Query: 177  LGTPMFQVVQRIKTCXXXXXXXXXXXXMNSAAIILVIKRELESMQDEGGQRNWC*WNRLQ 356
              TP   + +RI +C            +NS   I  ++  L    +   + +     +LQ
Sbjct: 422  RSTP---ITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQ 478

Query: 357  ERLGEKYKEEELYWCQKFRVQWLKEDDMNTKFFHVYTVQRRWKNCIDGLVDDQGLECTKP 536
            E L + + +EE+YW QK R QW+KE D NT +FH  T  R  +N ++ ++DDQG   T  
Sbjct: 479  ESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGD 538

Query: 537  EQIEAGLTASYRQLFSSSFSLGWEKALEGLSRPITSSMNHRLVRLVDDSEI 689
            ++I       +  +FS++               +T+++N  L +   D+EI
Sbjct: 539  KEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEI 589


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 55/229 (24%), Positives = 108/229 (47%)
 Frame = +3

Query: 3    FPNALVNHIPKQSADHCMLVFEDKP*IEHSKPRFCFDRSLLELPEVEKVVRESWNKSQLG 182
            FP      +P   +DH  ++ +    +   + +F +DR   +  +    V+  WN+ +  
Sbjct: 569  FPAFETEFLPIAGSDHAPVIIDIAEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWNRGRSD 628

Query: 183  TPMFQVVQRIKTCXXXXXXXXXXXXMNSAAIILVIKRELESMQDEGGQRNWC*WNRLQER 362
            +      +++  C             N+A  I  +K  +++ + +    +     RL++ 
Sbjct: 629  SHG-GYYEKLHCCRQELAKWKRRTKTNTAEKIETLKYRVDAAERDHTLPHQTIL-RLRQD 686

Query: 363  LGEKYKEEELYWCQKFRVQWLKEDDMNTKFFHVYTVQRRWKNCIDGLVDDQGLECTKPEQ 542
            L + Y++EELYW  K R +W+   D NT FF+  T  R+ +N I  + D QG+E  + + 
Sbjct: 687  LNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDT 746

Query: 543  IEAGLTASYRQLFSSSFSLGWEKALEGLSRPITSSMNHRLVRLVDDSEI 689
            I       +  LF+++ +  WE+ + G++  +T  MNH L++ V D E+
Sbjct: 747  IGKVAENYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEV 795