BLASTX nr result
ID: Cephaelis21_contig00037632
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00037632 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 79 4e-13 gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 79 5e-13 gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana] 77 1e-12 gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali... 77 1e-12 ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 >gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 79.0 bits (193), Expect = 4e-13 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -3 Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMIN-GVEDEGIQCALVRKIR 237 IG+C+ AELWG GL +AWDKGFR VE++LD + ++ GV + LVR + Sbjct: 1107 IGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQ 1166 Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150 RDW HVYREAN+LAD +A ++ Sbjct: 1167 GFFTRDWLVRVSHVYREANRLADGLANYA 1195 >gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 970 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Frame = -3 Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMIN-GVEDEGIQCALVRKIR 237 IG+C AELWG GL +AWDKGFR VE+ LDS + ++ G+ LVR + Sbjct: 846 IGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQ 905 Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150 RDW HVYREAN+LAD +A ++ Sbjct: 906 GFFTRDWLVRVSHVYREANRLADGLANYA 934 >gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana] Length = 253 Score = 77.4 bits (189), Expect = 1e-12 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -3 Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMI-NGVEDEGIQCALVRKIR 237 IG CS AELWG GL++AW++G +E+E+DS + + G++D LVR Sbjct: 129 IGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCH 188 Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150 + +DW+ HVYREAN+LAD +A ++ Sbjct: 189 GLLSKDWSVRISHVYREANRLADGLANYA 217 >gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana] gi|55978717|gb|AAV68820.1| hypothetical protein AT1G17390 [Arabidopsis thaliana] Length = 272 Score = 77.4 bits (189), Expect = 1e-12 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%) Frame = -3 Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMI-NGVEDEGIQCALVRKIR 237 IG CS AELWG GL++AW++G +E+E+DS + + G++D LVR Sbjct: 148 IGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCH 207 Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150 + +DW+ HVYREAN+LAD +A ++ Sbjct: 208 GLLSKDWSVRISHVYREANRLADGLANYA 236 >ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1| predicted protein [Populus trichocarpa] Length = 245 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%) Frame = -3 Query: 419 RIIGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMINGVE---DEGIQCALV 249 R IG CS + AELW GL LAWD+GFR V++E DS + +ING D ++ Sbjct: 118 RNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN--II 175 Query: 248 RKIRQMCKRDWNCECRHVYREANKLADSIAKFSRNQE 138 +I+ M RDW HVYREAN +AD +A + ++ Sbjct: 176 MQIKGMLGRDWEVTTYHVYREANCVADWLANYGLTRD 212