BLASTX nr result

ID: Cephaelis21_contig00037632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037632
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    79   4e-13
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    79   5e-13
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                77   1e-12
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali...    77   1e-12
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 413  IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMIN-GVEDEGIQCALVRKIR 237
            IG+C+   AELWG   GL +AWDKGFR VE++LD    +  ++ GV +      LVR  +
Sbjct: 1107 IGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAHPLSFLVRLCQ 1166

Query: 236  QMCKRDWNCECRHVYREANKLADSIAKFS 150
                RDW     HVYREAN+LAD +A ++
Sbjct: 1167 GFFTRDWLVRVSHVYREANRLADGLANYA 1195


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 413  IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMIN-GVEDEGIQCALVRKIR 237
            IG+C    AELWG   GL +AWDKGFR VE+ LDS   +  ++ G+        LVR  +
Sbjct: 846  IGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAHPLSFLVRLCQ 905

Query: 236  QMCKRDWNCECRHVYREANKLADSIAKFS 150
                RDW     HVYREAN+LAD +A ++
Sbjct: 906  GFFTRDWLVRVSHVYREANRLADGLANYA 934


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMI-NGVEDEGIQCALVRKIR 237
           IG CS   AELWG   GL++AW++G   +E+E+DS   +  +  G++D      LVR   
Sbjct: 129 IGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCH 188

Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150
            +  +DW+    HVYREAN+LAD +A ++
Sbjct: 189 GLLSKDWSVRISHVYREANRLADGLANYA 217


>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
           gi|55978717|gb|AAV68820.1| hypothetical protein
           AT1G17390 [Arabidopsis thaliana]
          Length = 272

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 413 IGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMI-NGVEDEGIQCALVRKIR 237
           IG CS   AELWG   GL++AW++G   +E+E+DS   +  +  G++D      LVR   
Sbjct: 148 IGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFLRTGIDDSHPLSFLVRLCH 207

Query: 236 QMCKRDWNCECRHVYREANKLADSIAKFS 150
            +  +DW+    HVYREAN+LAD +A ++
Sbjct: 208 GLLSKDWSVRISHVYREANRLADGLANYA 236


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -3

Query: 419 RIIGNCSVLQAELWGCLDGLSLAWDKGFRNVEVELDSAEAINMINGVE---DEGIQCALV 249
           R IG CS + AELW    GL LAWD+GFR V++E DS   + +ING     D      ++
Sbjct: 118 RNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN--II 175

Query: 248 RKIRQMCKRDWNCECRHVYREANKLADSIAKFSRNQE 138
            +I+ M  RDW     HVYREAN +AD +A +   ++
Sbjct: 176 MQIKGMLGRDWEVTTYHVYREANCVADWLANYGLTRD 212


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