BLASTX nr result

ID: Cephaelis21_contig00037631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037631
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316299.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002332576.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002531375.1| RNA and export factor binding protein, putat...   114   6e-24
emb|CAG26903.1| ALY protein [Nicotiana benthamiana]                   114   8e-24
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   113   1e-23

>ref|XP_002316299.1| predicted protein [Populus trichocarpa] gi|222865339|gb|EEF02470.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/79 (69%), Positives = 73/79 (92%)
 Frame = +3

Query: 3   KLYVSNLNDGVSNEDIKVLFSDVGKLKRYAIHYGMNGRSQGTAEVVYARHSDALSAIKRY 182
           KLY+SNL+ GVSNEDIKVLFS+VG+L RY++HY M+GRS+GTAEVV++R +DAL+AI+RY
Sbjct: 86  KLYISNLDYGVSNEDIKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRY 145

Query: 183 DDVHLDGRPIKIELVGFDV 239
           ++V LDG+P+KIELVG +V
Sbjct: 146 NNVQLDGKPLKIELVGVNV 164


>ref|XP_002332576.1| predicted protein [Populus trichocarpa] gi|222832914|gb|EEE71391.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/79 (69%), Positives = 73/79 (92%)
 Frame = +3

Query: 3   KLYVSNLNDGVSNEDIKVLFSDVGKLKRYAIHYGMNGRSQGTAEVVYARHSDALSAIKRY 182
           KLY+SNL+ GVSNEDIKVLFS+VG+L RY++HY M+GRS+GTAEVV++R +DAL+AI+RY
Sbjct: 13  KLYISNLDYGVSNEDIKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRY 72

Query: 183 DDVHLDGRPIKIELVGFDV 239
           ++V LDG+P+KIELVG +V
Sbjct: 73  NNVQLDGKPLKIELVGVNV 91


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/79 (67%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   KLYVSNLNDGVSNEDIKVLFSDVGKLKRYAIHYGMNGRSQGTAEVVYARHSDALSAIKRY 182
           KLY+SNL  GVSNEDIK LFS+VG LKRY+IHY  +GRS+GTAEVV++R +DAL+A+KRY
Sbjct: 92  KLYISNLEYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRY 151

Query: 183 DDVHLDGRPIKIELVGFDV 239
           ++V LDG+P+KIE+VG ++
Sbjct: 152 NNVQLDGKPMKIEIVGTNI 170


>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
          Length = 252

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/79 (67%), Positives = 69/79 (87%)
 Frame = +3

Query: 3   KLYVSNLNDGVSNEDIKVLFSDVGKLKRYAIHYGMNGRSQGTAEVVYARHSDALSAIKRY 182
           KLY+SNL+ GVSNEDIK LFS+ G LKRYAIHY  +GRS+GTAEVV++R  DAL+A+KRY
Sbjct: 94  KLYISNLDYGVSNEDIKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRY 153

Query: 183 DDVHLDGRPIKIELVGFDV 239
           ++V LDG+P+KIE+VG ++
Sbjct: 154 NNVQLDGKPMKIEIVGTNI 172


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/79 (65%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   KLYVSNLNDGVSNEDIKVLFSDVGKLKRYAIHYGMNGRSQGTAEVVYARHSDALSAIKRY 182
           KLY+SNL+ GVSNEDIK LFS+VG LKRY+IHY  +GRS+GTAEVV++R  DA++A+KRY
Sbjct: 88  KLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRY 147

Query: 183 DDVHLDGRPIKIELVGFDV 239
           ++V LDG+P+KIE+VG ++
Sbjct: 148 NNVQLDGKPMKIEIVGTNI 166


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