BLASTX nr result

ID: Cephaelis21_contig00037595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037595
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   324   6e-87
gb|AAS80153.1| ACT11D09.9 [Cucumis melo]                              318   3e-85
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   317   6e-85
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   317   1e-84
ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation spec...   304   5e-81

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  324 bits (830), Expect = 6e-87
 Identities = 151/181 (83%), Positives = 170/181 (93%)
 Frame = -1

Query: 545 VTMNGKRIMFDCGMHMGYTDHRRYPDFSRIPRAADQDFTSSLTCVIITHFHLDHIGALPY 366
           VT+NGKRIMFDCGMHMGY DHRRYPDFS I ++ D  F S+L CVIITHFHLDH+GALPY
Sbjct: 21  VTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSGD--FDSALHCVIITHFHLDHVGALPY 78

Query: 365 FTEVCGYSGPIYMTYPTKALAPLMLEDYCKVMVERRGEEEQFTSEHIKECIKKVTAVDLK 186
           FTEVCGY+GP+YMTYPTKAL+PLMLEDY KVMV+RRGEEEQFT++HIK+C+ KV AVDLK
Sbjct: 79  FTEVCGYNGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTADHIKQCLNKVIAVDLK 138

Query: 185 QTLQIDKDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDKLQLDL 6
           QT+Q+DKDLQIRAYYAGHVLGAAMFYAKVGD+A+VYTGDYNMTPDRHLGAAQID+LQLDL
Sbjct: 139 QTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLQLDL 198

Query: 5   V 3
           +
Sbjct: 199 L 199


>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
          Length = 708

 Score =  318 bits (816), Expect = 3e-85
 Identities = 146/181 (80%), Positives = 169/181 (93%)
 Frame = -1

Query: 545 VTMNGKRIMFDCGMHMGYTDHRRYPDFSRIPRAADQDFTSSLTCVIITHFHLDHIGALPY 366
           VT+NGKRIMFDCGMH+GY DHRRYPDFSRI  +A +D+ ++L+C+IITHFHLDHIGALPY
Sbjct: 53  VTINGKRIMFDCGMHLGYVDHRRYPDFSRI--SASRDYNNTLSCIIITHFHLDHIGALPY 110

Query: 365 FTEVCGYSGPIYMTYPTKALAPLMLEDYCKVMVERRGEEEQFTSEHIKECIKKVTAVDLK 186
           FTE+CGY+GPIYMTYPT ALAP+ LEDY KVMV+RRGE EQFT++HI EC+KKV  VDLK
Sbjct: 111 FTEICGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLK 170

Query: 185 QTLQIDKDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDKLQLDL 6
           QT+Q+D+DLQIRAYYAGHVLGAAMFYAKVGDAA+VYTGDYNMTPDRHLGAAQID++QLDL
Sbjct: 171 QTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDL 230

Query: 5   V 3
           +
Sbjct: 231 L 231


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  317 bits (813), Expect = 6e-85
 Identities = 147/181 (81%), Positives = 167/181 (92%)
 Frame = -1

Query: 545 VTMNGKRIMFDCGMHMGYTDHRRYPDFSRIPRAADQDFTSSLTCVIITHFHLDHIGALPY 366
           VT+NGKRIMFDCGMH+GY DHRRYPDFSRI  +A  D+ + L+C+IITHFHLDHIGALPY
Sbjct: 21  VTINGKRIMFDCGMHLGYVDHRRYPDFSRI--SASHDYNNVLSCIIITHFHLDHIGALPY 78

Query: 365 FTEVCGYSGPIYMTYPTKALAPLMLEDYCKVMVERRGEEEQFTSEHIKECIKKVTAVDLK 186
           FTEVCGY+GPIYMTYPT ALAP+ LEDY KVMV+RRGE EQFT++HI EC+KKV  VDLK
Sbjct: 79  FTEVCGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLK 138

Query: 185 QTLQIDKDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDKLQLDL 6
           QT+Q+D+DLQIRAYYAGHVLGAAMFYAKVGDAA+VYTGDYNMTPDRHLGAAQID++QLDL
Sbjct: 139 QTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDL 198

Query: 5   V 3
           +
Sbjct: 199 L 199


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  317 bits (811), Expect = 1e-84
 Identities = 149/181 (82%), Positives = 168/181 (92%)
 Frame = -1

Query: 545 VTMNGKRIMFDCGMHMGYTDHRRYPDFSRIPRAADQDFTSSLTCVIITHFHLDHIGALPY 366
           VT+NGKRIMFDCGMHMGY DHRRYPDFS I ++  +DF  SL CVIITHFHLDH+GALPY
Sbjct: 21  VTINGKRIMFDCGMHMGYDDHRRYPDFSLISKS--RDFDHSLDCVIITHFHLDHVGALPY 78

Query: 365 FTEVCGYSGPIYMTYPTKALAPLMLEDYCKVMVERRGEEEQFTSEHIKECIKKVTAVDLK 186
           FTEVCGY+GPIYMTYPTKALAPLMLED+ KV+V+RRGEEEQFTS HI +C++KV AVDLK
Sbjct: 79  FTEVCGYNGPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQFTSLHISQCMEKVIAVDLK 138

Query: 185 QTLQIDKDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDKLQLDL 6
           QT+Q+D DLQIRAYYAGHVLGAAMFYAKVGD+A+VYTGDYNMTPDRHLGAAQID+L+LDL
Sbjct: 139 QTVQVDDDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLELDL 198

Query: 5   V 3
           +
Sbjct: 199 L 199


>ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Glycine max]
          Length = 516

 Score =  304 bits (779), Expect = 5e-81
 Identities = 142/181 (78%), Positives = 165/181 (91%)
 Frame = -1

Query: 545 VTMNGKRIMFDCGMHMGYTDHRRYPDFSRIPRAADQDFTSSLTCVIITHFHLDHIGALPY 366
           VT+N KRIMFDCGMHMGY DHRRYPDF+RI  +  +D  S+L+C+IITHFHLDH+GAL Y
Sbjct: 21  VTINAKRIMFDCGMHMGYLDHRRYPDFTRI--SPSRDLNSALSCIIITHFHLDHVGALAY 78

Query: 365 FTEVCGYSGPIYMTYPTKALAPLMLEDYCKVMVERRGEEEQFTSEHIKECIKKVTAVDLK 186
           FTEV GY+GP+YMTYPTKALAPLMLEDY KVMV+RRGEEE F+S+ I EC+KKV AVDL+
Sbjct: 79  FTEVLGYNGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSDQIAECMKKVIAVDLR 138

Query: 185 QTLQIDKDLQIRAYYAGHVLGAAMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDKLQLDL 6
           QT+Q++KDLQIRAYYAGHV+GAAMFYAKVGDA +VYTGDYNMTPDRHLGAAQID+L+LDL
Sbjct: 139 QTVQVEKDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDL 198

Query: 5   V 3
           +
Sbjct: 199 L 199


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