BLASTX nr result
ID: Cephaelis21_contig00037594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00037594
(1642 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178282.2| cleavage and polyadenylation specificity factor... 301 e-119
gb|AAN87883.1| FEG protein [Arabidopsis thaliana] 293 e-117
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 396 e-107
gb|AAD12712.1| putative cleavage and polyadenylation specifity f... 259 e-106
ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arab... 257 e-106
>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and
polyadenylation specifity factor [Arabidopsis thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
specificity factor subunit 3-II [Arabidopsis thaliana]
Length = 613
Score = 301 bits (771), Expect(2) = e-119
Identities = 161/340 (47%), Positives = 217/340 (63%), Gaps = 1/340 (0%)
Frame = -1
Query: 1285 NAHQ-LDKPKVLKFERSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEGNLVTLPGYC 1109
N H D V F+RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY
Sbjct: 294 NTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYS 353
Query: 1108 VSGTVGHRLMSAKTPTQVNIDQNTQIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHVIL 929
V+GTVGH+LM+ K PT V++ T++DVRC++HQ++FSPHTDAKGIMDL KFLSPK+V+L
Sbjct: 354 VAGTVGHKLMAGK-PTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVL 412
Query: 928 VHGEKPKMESLKARIESDFAIQCYFPANNDSVIIPSTHYVKADASSAFLRSTWSPNFKFL 749
VHGEKP M LK +I S+ I C+ PAN ++V ST Y+KA+AS FL+S +PNFKF
Sbjct: 413 VHGEKPSMMILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFS 472
Query: 748 RNSSRGNFGSSDVDTAKLLQICDDRVSEGILTTGKNQNPKILHLKELLLMSGGESHEVQF 569
++ L++ D R ++G+L K++ KI+H E+ + ++H V
Sbjct: 473 NSTQ--------------LRVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSL 518
Query: 568 ALCLPVRSVNMAEKENLQKEHVPWLHQLFLKLVDEFSEATIQESVQSLQIESIVLSVCSV 389
A C PV+ +E ++ V + QL K++ S A I ES LQ+ S S+C
Sbjct: 519 AHCCPVKVKGESEDDD-----VDLIKQLSAKILKTVSGAQIHESENCLQVASFKGSLCLK 573
Query: 388 DNCPYRTCTDSYNISEAVFFCCKWSAVDQKLAWKVISVIQ 269
D C +R+ + S SEAVF CC WS D +L W++I+ I+
Sbjct: 574 DKCMHRSSSSS---SEAVFLCCNWSIADLELGWEIINAIK 610
Score = 155 bits (393), Expect(2) = e-119
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = -2
Query: 1515 STYATTFRDSKYVREREFLKAVHNCVAGGGKVLIPSFALGRAQELCMLLDDFWERMNLKV 1336
STYATT R SKY REREFL+AVH CVAGGGK LIPSFALGRAQELCMLLDD+WERMN+KV
Sbjct: 203 STYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKV 262
Query: 1335 PIYFSAGLTIQANIYYKTLINWTSQ 1261
PIYFS+GLTIQAN+YYK LI+WTSQ
Sbjct: 263 PIYFSSGLTIQANMYYKMLISWTSQ 287
>gb|AAN87883.1| FEG protein [Arabidopsis thaliana]
Length = 613
Score = 293 bits (751), Expect(2) = e-117
Identities = 158/340 (46%), Positives = 214/340 (62%), Gaps = 1/340 (0%)
Frame = -1
Query: 1285 NAHQ-LDKPKVLKFERSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEGNLVTLPGYC 1109
N H D V F+RSLI+APGPCVLFA PGM+ G SLEVFK WAP NLV L GY
Sbjct: 294 NTHNPFDFKNVKDFDRSLIHAPGPCVLFAIPGMLCAGLSLEVFKHWAPSPLNLVALLGYS 353
Query: 1108 VSGTVGHRLMSAKTPTQVNIDQNTQIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHVIL 929
V+GTVGH+LM+ K PT V++ T++DVRC++HQ++FSPHTDAKGIMDL KFLSPK+V+L
Sbjct: 354 VAGTVGHKLMAGK-PTTVDLHNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVL 412
Query: 928 VHGEKPKMESLKARIESDFAIQCYFPANNDSVIIPSTHYVKADASSAFLRSTWSPNFKFL 749
VHGEKP M LK +I S+ I C+ PAN ++V ST Y+KA+AS FL+S +PNFKF
Sbjct: 413 VHGEKPSMMILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFS 472
Query: 748 RNSSRGNFGSSDVDTAKLLQICDDRVSEGILTTGKNQNPKILHLKELLLMSGGESHEVQF 569
++ L++ D R ++G+L K++ KI+H E+ + ++H V
Sbjct: 473 NSTQ--------------LRVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSL 518
Query: 568 ALCLPVRSVNMAEKENLQKEHVPWLHQLFLKLVDEFSEATIQESVQSLQIESIVLSVCSV 389
A C PV+ +E ++ V + QL K++ S A I ES LQ+ S S+C
Sbjct: 519 AHCCPVKVKGESEDDD-----VDLIKQLSAKILKTVSGAQIHESENCLQVASFKGSLCLK 573
Query: 388 DNCPYRTCTDSYNISEAVFFCCKWSAVDQKLAWKVISVIQ 269
D C +R+ + S SEAVF CC WS D +L W++I+ I+
Sbjct: 574 DKCMHRSSSSS---SEAVFLCCNWSIADLELGWEIINAIK 610
Score = 155 bits (393), Expect(2) = e-117
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = -2
Query: 1515 STYATTFRDSKYVREREFLKAVHNCVAGGGKVLIPSFALGRAQELCMLLDDFWERMNLKV 1336
STYATT R SKY REREFL+AVH CVAGGGK LIPSFALGRAQELCMLLDD+WERMN+KV
Sbjct: 203 STYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKV 262
Query: 1335 PIYFSAGLTIQANIYYKTLINWTSQ 1261
PIYFS+GLTIQAN+YYK LI+WTSQ
Sbjct: 263 PIYFSSGLTIQANMYYKMLISWTSQ 287
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 396 bits (1017), Expect = e-107
Identities = 202/350 (57%), Positives = 252/350 (72%), Gaps = 2/350 (0%)
Frame = -1
Query: 1297 YILQNAHQLDKPKVLKFERSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEGNLVTLP 1118
Y NA D V F+RSLINAPGPCVLFATPGMISGGFSLEVFK WAP E NLVTLP
Sbjct: 348 YATHNA--FDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLP 405
Query: 1117 GYCVSGTVGHRLMSAKTPTQVNIDQNTQIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKH 938
GYC++GT+GH+L + K PT++++D++ QI VRCQIHQLSFSPHTDAKGIMDL+KFLSPKH
Sbjct: 406 GYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH 464
Query: 937 VILVHGEKPKMESLKARIESDFAIQCYFPANNDSVIIPSTHYVKADASSAFLRSTWSPNF 758
VILVHGEKPKM SLK +IESD IQCY+PANND+V IPST ++KAD S F+RS+ +PNF
Sbjct: 465 VILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNF 524
Query: 757 KFLRNSS--RGNFGSSDVDTAKLLQICDDRVSEGILTTGKNQNPKILHLKELLLMSGGES 584
KF++ S + N S + + +LQ+ D+RV+EGIL K++ K++H ELLLM G +
Sbjct: 525 KFVKTISEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDK 584
Query: 583 HEVQFALCLPVRSVNMAEKENLQKEHVPWLHQLFLKLVDEFSEATIQESVQSLQIESIVL 404
H+VQFA C P N+ + WLH LF KL + IQ+ Q LQ++SI +
Sbjct: 585 HDVQFAYCCP----NVVS----TSDECSWLHLLFAKLATKLG-GNIQDFGQHLQVDSIHI 635
Query: 403 SVCSVDNCPYRTCTDSYNISEAVFFCCKWSAVDQKLAWKVISVIQNMKLN 254
SVC D CPYRT TD AVFFCC WS D LAW++IS+++N+ L+
Sbjct: 636 SVCLKDICPYRT-TDGPQKEPAVFFCCTWSVADVNLAWEIISIMENLDLS 684
Score = 156 bits (394), Expect = 2e-35
Identities = 73/86 (84%), Positives = 81/86 (94%)
Frame = -2
Query: 1515 STYATTFRDSKYVREREFLKAVHNCVAGGGKVLIPSFALGRAQELCMLLDDFWERMNLKV 1336
STYATT RDSKY REREFLKAVH CVA GGKVLIP+FALGRAQELC+LLD++WERMNLKV
Sbjct: 258 STYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQELCILLDNYWERMNLKV 317
Query: 1335 PIYFSAGLTIQANIYYKTLINWTSQK 1258
PIYFSAGLTIQAN+YYK LI+WT+Q+
Sbjct: 318 PIYFSAGLTIQANMYYKMLISWTNQR 343
>gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 259 bits (661), Expect(2) = e-106
Identities = 140/289 (48%), Positives = 186/289 (64%), Gaps = 1/289 (0%)
Frame = -1
Query: 1285 NAHQ-LDKPKVLKFERSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEGNLVTLPGYC 1109
N H D V F+RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY
Sbjct: 294 NTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYS 353
Query: 1108 VSGTVGHRLMSAKTPTQVNIDQNTQIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHVIL 929
V+GTVGH+LM+ K PT V++ T++DVRC++HQ++FSPHTDAKGIMDL KFLSPK+V+L
Sbjct: 354 VAGTVGHKLMAGK-PTTVDLYNGTKVDVRCKVHQVAFSPHTDAKGIMDLTKFLSPKNVVL 412
Query: 928 VHGEKPKMESLKARIESDFAIQCYFPANNDSVIIPSTHYVKADASSAFLRSTWSPNFKFL 749
VHGEKP M LK +I S+ I C+ PAN ++V ST Y+KA+AS FL+S +PNFKF
Sbjct: 413 VHGEKPSMMILKEKITSELDIPCFVPANGETVSFASTTYIKANASDMFLKSCSNPNFKFS 472
Query: 748 RNSSRGNFGSSDVDTAKLLQICDDRVSEGILTTGKNQNPKILHLKELLLMSGGESHEVQF 569
++ L++ D R ++G+L K++ KI+H E+ + ++H V
Sbjct: 473 NSTQ--------------LRVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSL 518
Query: 568 ALCLPVRSVNMAEKENLQKEHVPWLHQLFLKLVDEFSEATIQESVQSLQ 422
A C PV+ +E ++ V + QL K++ S A I ES LQ
Sbjct: 519 AHCCPVKVKGESEDDD-----VDLIKQLSAKILKTVSGAQIHESENCLQ 562
Score = 155 bits (393), Expect(2) = e-106
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = -2
Query: 1515 STYATTFRDSKYVREREFLKAVHNCVAGGGKVLIPSFALGRAQELCMLLDDFWERMNLKV 1336
STYATT R SKY REREFL+AVH CVAGGGK LIPSFALGRAQELCMLLDD+WERMN+KV
Sbjct: 203 STYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKV 262
Query: 1335 PIYFSAGLTIQANIYYKTLINWTSQ 1261
PIYFS+GLTIQAN+YYK LI+WTSQ
Sbjct: 263 PIYFSSGLTIQANMYYKMLISWTSQ 287
>ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata] gi|297320925|gb|EFH51346.1| hypothetical protein
ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata]
Length = 819
Score = 257 bits (656), Expect(2) = e-106
Identities = 139/284 (48%), Positives = 183/284 (64%), Gaps = 1/284 (0%)
Frame = -1
Query: 1285 NAHQ-LDKPKVLKFERSLINAPGPCVLFATPGMISGGFSLEVFKQWAPYEGNLVTLPGYC 1109
N H D V F+RSLI+APGPCVLFATPGM+ GFSLEVFK WAP NLV LPGY
Sbjct: 294 NTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYS 353
Query: 1108 VSGTVGHRLMSAKTPTQVNIDQNTQIDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHVIL 929
V+GTVGH+LMS K PT V++ T++DVRC+IHQ++FSPHTDAKGIMDL KFLSPK+V+L
Sbjct: 354 VAGTVGHKLMSGK-PTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVL 412
Query: 928 VHGEKPKMESLKARIESDFAIQCYFPANNDSVIIPSTHYVKADASSAFLRSTWSPNFKFL 749
VHGEKP M LK +I S+ I C+ PAN ++V + ST Y+KA+AS FL+S SPNFKF
Sbjct: 413 VHGEKPSMMILKDKITSELDIPCFVPANGETVSVASTTYIKANASDMFLKSCSSPNFKFS 472
Query: 748 RNSSRGNFGSSDVDTAKLLQICDDRVSEGILTTGKNQNPKILHLKELLLMSGGESHEVQF 569
++ L++ D R ++G+L K++ KI+H E+ + ++H V
Sbjct: 473 NSTQ--------------LRVTDQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKNHVVSL 518
Query: 568 ALCLPVRSVNMAEKENLQKEHVPWLHQLFLKLVDEFSEATIQES 437
A C PV+ ++ + + QL K++ S A I ES
Sbjct: 519 AYCCPVKVKGESDND------ADLIKQLSEKILKTVSGAQIHES 556
Score = 155 bits (393), Expect(2) = e-106
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = -2
Query: 1515 STYATTFRDSKYVREREFLKAVHNCVAGGGKVLIPSFALGRAQELCMLLDDFWERMNLKV 1336
STYATT R SKY REREFL+AVH CVAGGGK LIPSFALGRAQELCMLLDD+WERMN+KV
Sbjct: 203 STYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKV 262
Query: 1335 PIYFSAGLTIQANIYYKTLINWTSQ 1261
PIYFS+GLTIQAN+YYK LI+WTSQ
Sbjct: 263 PIYFSSGLTIQANMYYKMLISWTSQ 287