BLASTX nr result

ID: Cephaelis21_contig00037417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037417
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517705.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...    75   4e-12
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...    75   5e-12
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...    74   1e-11
emb|CBI15364.3| unnamed protein product [Vitis vinifera]               74   1e-11

>ref|XP_002517705.1| conserved hypothetical protein [Ricinus communis]
           gi|223543103|gb|EEF44637.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/78 (61%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = -1

Query: 335 VKLLSMEKSVRGAIKLVTALKLPNLAERFNAILEERLMNEAMGSTILH--ATVKSDAPLQ 162
           VKLLS+EKSV+GAIKLVTALKLPNLAERFN+ILEERL+NE+   T+ H  A  K + P+ 
Sbjct: 31  VKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEERLLNESK-ETLNHTLANSKGNVPIA 89

Query: 161 ANDAFCRPSLVESSKQKE 108
           AN   C+ S+  SS++ E
Sbjct: 90  ANITVCKTSV--SSEKSE 105


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = -1

Query: 335 VKLLSMEKSVRGAIKLVTALKLPNLAERFNAILEERLMNEAMG 207
           VKLLS+EKSV+GAIKLVTALKLPNLAERFNAILEERL+NE  G
Sbjct: 785 VKLLSLEKSVKGAIKLVTALKLPNLAERFNAILEERLLNETKG 827


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
            gi|355484738|gb|AES65941.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 991

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/73 (58%), Positives = 52/73 (71%)
 Frame = -1

Query: 335  VKLLSMEKSVRGAIKLVTALKLPNLAERFNAILEERLMNEAMGSTILHATVKSDAPLQAN 156
            VKLLS+EKS++GAIKLVTALKLPNLAE+FN ILEERL NE   +T  +    S AP+  +
Sbjct: 823  VKLLSLEKSMKGAIKLVTALKLPNLAEKFNDILEERLYNEVKKTTETNLKENSSAPV-TS 881

Query: 155  DAFCRPSLVESSK 117
            D     S  E+SK
Sbjct: 882  DTLPTSSKAETSK 894


>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/71 (60%), Positives = 50/71 (70%)
 Frame = -1

Query: 335 VKLLSMEKSVRGAIKLVTALKLPNLAERFNAILEERLMNEAMGSTILHATVKSDAPLQAN 156
           VKLLS+EKSV+GAIKLVTALKLPNLAERFN+ILEERL+NE      L  T  +      +
Sbjct: 778 VKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEERLLNETSRPATLPLTSSN------H 831

Query: 155 DAFCRPSLVES 123
           DA   P +V S
Sbjct: 832 DASTTPDVVMS 842


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/71 (60%), Positives = 50/71 (70%)
 Frame = -1

Query: 335 VKLLSMEKSVRGAIKLVTALKLPNLAERFNAILEERLMNEAMGSTILHATVKSDAPLQAN 156
           VKLLS+EKSV+GAIKLVTALKLPNLAERFN+ILEERL+NE      L  T  +      +
Sbjct: 739 VKLLSLEKSVKGAIKLVTALKLPNLAERFNSILEERLLNETSRPATLPLTSSN------H 792

Query: 155 DAFCRPSLVES 123
           DA   P +V S
Sbjct: 793 DASTTPDVVMS 803


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