BLASTX nr result

ID: Cephaelis21_contig00037411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037411
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...   149   2e-34
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   139   2e-31
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   138   5e-31
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   138   5e-31
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo...   138   5e-31

>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/136 (49%), Positives = 99/136 (72%)
 Frame = +1

Query: 43  TYYENLFTFSYPDECDDILEGLPKTISESMNANLTRPVEEQEIKRALFSMHSHKAPGPNG 222
           T++E+LF+ SYP   D +LEG  K ++E MN +LT+ V EQEI +A+FS+++  APGP+G
Sbjct: 120 TFFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDG 179

Query: 223 MPPFFFQKFWNIVGEDICNAVKAFFQSNFMLAAFNHTLICLVPKVPNPSKVADFRPISLC 402
               FFQ+ W +V   I + ++ FFQ+  +   +NHT +CL+PK+  P+++AD RPISLC
Sbjct: 180 FTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPISLC 239

Query: 403 NVVYKIISKILADRLK 450
           +V+YKIISKIL+ RLK
Sbjct: 240 SVMYKIISKILSARLK 255


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/149 (42%), Positives = 95/149 (63%)
 Frame = +1

Query: 4   EYKEDEEIAGEITTYYENLFTFSYPDECDDILEGLPKTISESMNANLTRPVEEQEIKRAL 183
           E+  DE++      Y++ LF         + LE L   +S+ MN NL  P+ ++E++RA 
Sbjct: 378 EWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRAT 437

Query: 184 FSMHSHKAPGPNGMPPFFFQKFWNIVGEDICNAVKAFFQSNFMLAAFNHTLICLVPKVPN 363
           FS++ HK PGP+GM  F +Q+FW  +G+ I   V+AFF+S  +    N T ICL+PK+  
Sbjct: 438 FSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILK 497

Query: 364 PSKVADFRPISLCNVVYKIISKILADRLK 450
             K+ DFRPISLCNV+YK+I K++A+RLK
Sbjct: 498 AEKMTDFRPISLCNVIYKVIGKLMANRLK 526


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/139 (48%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 37   ITTYYENLFTFSYPDECDDILEGLPKTISESMNANLTRPVEEQEIKRALFSMHSHKAP-G 213
            I+ +Y+ LFT   P   D++L+ +PK ++ +MN  L + V  +EIK+AL S+   KAP G
Sbjct: 845  ISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPG 904

Query: 214  PNGMPPFFFQKFWNIVGEDICNAVKAFFQSNFMLAAFNHTLICLVPKVPNPSKVADFRPI 393
             +GMP  F+++FW  VG+DI + VK F     M  ++N T++ L+PKVPNP ++ D RPI
Sbjct: 905  SDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPI 964

Query: 394  SLCNVVYKIISKILADRLK 450
            SLCNVVYKI SK+LA+RLK
Sbjct: 965  SLCNVVYKIASKVLANRLK 983


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  138 bits (347), Expect = 5e-31
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
 Frame = +1

Query: 19  EEIAGEITTYYENLFTFS-----YPDECDDILEGLPKTISESMNANLTRPVEEQEIKRAL 183
           ++I GE   Y+ ++F  S     Y +E D I   +P+ I      +L +PV  +E++  +
Sbjct: 392 QDIQGEFLGYFADIFQGSQHSQEYWEELDGIRHLIPQ-IDLMQREDLIKPVTREEVRNVV 450

Query: 184 FSMHSHKAPGPNGMPPFFFQKFWNIVGEDICNAVKAFFQSNFMLAAFNHTLICLVPKVPN 363
           F M S KAPGP+G+P  F+QK W+IVGEDI  AV  FF + ++L  +N T ICL+PKV  
Sbjct: 451 FQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVER 510

Query: 364 PSKVADFRPISLCNVVYKIISKILADRLK 450
           P +   FRPISLCNV+YKIISKI+A+RLK
Sbjct: 511 PEQACQFRPISLCNVIYKIISKIIANRLK 539


>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/139 (48%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 37  ITTYYENLFTFSYPDECDDILEGLPKTISESMNANLTRPVEEQEIKRALFSMHSHKAP-G 213
           I+ +Y+ LFT   P   D++L+ +PK ++ +MN  L + V  +EIK+AL S+   KAP G
Sbjct: 346 ISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPG 405

Query: 214 PNGMPPFFFQKFWNIVGEDICNAVKAFFQSNFMLAAFNHTLICLVPKVPNPSKVADFRPI 393
            +GMP  F+++FW  VG+DI + VK F     M  ++N T++ L+PKVPNP ++ D RPI
Sbjct: 406 SDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPI 465

Query: 394 SLCNVVYKIISKILADRLK 450
           SLCNVVYKI SK+LA+RLK
Sbjct: 466 SLCNVVYKIASKVLANRLK 484


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