BLASTX nr result

ID: Cephaelis21_contig00037408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037408
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   123   2e-26
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   119   3e-25
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   119   3e-25
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   115   4e-24
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   112   4e-23

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +1

Query: 232 MEQRLANTFRMTVNEKKFIETALRSDLRVDGRRPFDYRELTVKFGREDGSSEVQLGQTHV 411
           MEQRLA+TFRMTVNEKKFIE AL SDLR+DGRRPFD+R +++KFGREDGSSEVQLGQTHV
Sbjct: 1   MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 412 MGFVTSQLV 438
           MGFVT QL+
Sbjct: 61  MGFVTGQLI 69


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = +1

Query: 232 MEQRLANTFRMTVNEKKFIETALRSDLRVDGRRPFDYRELTVKFGREDGSSEVQLGQTHV 411
           MEQRLANT+R++ NEKKFIETAL SDLRVDGR PFDYR LT+ FG++DGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 412 MGFVTSQLV 438
           MGFVT+QLV
Sbjct: 61  MGFVTAQLV 69


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = +1

Query: 232 MEQRLANTFRMTVNEKKFIETALRSDLRVDGRRPFDYRELTVKFGREDGSSEVQLGQTHV 411
           MEQRLANT+R++ NEKKFIETAL SDLRVDGR PFDYR LT+ FG++DGSSEVQLGQTHV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 412 MGFVTSQLV 438
           MGFVT+QLV
Sbjct: 61  MGFVTAQLV 69


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/78 (74%), Positives = 65/78 (83%), Gaps = 9/78 (11%)
 Frame = +1

Query: 232 MEQRLANTFRMTVNEKKFIETALRSDLRVDGRRPFDYRELTVKFGR---------EDGSS 384
           MEQRLA+TFRMTVNEKKFIE AL SDLR+DGRRPFD+R +++KFGR         EDGSS
Sbjct: 1   MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 385 EVQLGQTHVMGFVTSQLV 438
           EVQLGQTHVMGFVT QL+
Sbjct: 61  EVQLGQTHVMGFVTGQLI 78


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
           gi|223529292|gb|EEF31262.1| exosome complex exonuclease
           rrp45, putative [Ricinus communis]
          Length = 463

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 64/69 (92%)
 Frame = +1

Query: 232 MEQRLANTFRMTVNEKKFIETALRSDLRVDGRRPFDYRELTVKFGREDGSSEVQLGQTHV 411
           ME R+A+T+RM+VNEKKFIE+AL SDLR+DGR   ++R+LT+KFGREDGSSEVQLGQTHV
Sbjct: 1   MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 412 MGFVTSQLV 438
           MGFVTSQLV
Sbjct: 61  MGFVTSQLV 69


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