BLASTX nr result

ID: Cephaelis21_contig00037335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037335
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   228   2e-85
gb|ABK26521.1| unknown [Picea sitchensis]                             183   3e-64
gb|ADE76509.1| unknown [Picea sitchensis]                             185   5e-64
tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea m...   181   3e-63
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   246   5e-63

>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  228 bits (581), Expect(2) = 2e-85
 Identities = 104/138 (75%), Positives = 120/138 (86%)
 Frame = +2

Query: 215  KKEPGMSWIEVKDKIHTFIVGDRSHSRTKDIYGKLDELGDLMAKAGYVPVIETDLHYVEH 394
            KKEPGMSWIE+KDK++TFIVGDRSH R+K+IY KLD+L + +  AGYVP+IETDLH VE 
Sbjct: 726  KKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQ 785

Query: 395  REKELLLAHHSEKLALAFGLLVTPEGAPIRIKKNLRICVDCHTAFKFICEIVSRAIIVRD 574
             EKE LL HHSEKLA+AFGL+ TP GAPIR+KKNLR+C+DCHTAFKFI ++ SR IIVRD
Sbjct: 786  IEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRD 845

Query: 575  NNRFHHFSDGSCSCGDYW 628
             NRFHHF DGSCSCGDYW
Sbjct: 846  INRFHHFRDGSCSCGDYW 863



 Score =  114 bits (285), Expect(2) = 2e-85
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   PFEPNAAVWGALLGAARIHKNVELGQHAAEMLLTYHPEKSGTHVLLSNMYASVGSWENVA 182
           PF+ +AAVWGALLGAARIHKN+ELG+HAAEMLLT  PEKSGTH+LL+N+YAS G W+NVA
Sbjct: 655 PFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVA 714

Query: 183 KTRRLMKET 209
           K RR MK +
Sbjct: 715 KVRRSMKNS 723


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  183 bits (465), Expect(2) = 3e-64
 Identities = 84/138 (60%), Positives = 102/138 (73%)
 Frame = +2

Query: 215 KKEPGMSWIEVKDKIHTFIVGDRSHSRTKDIYGKLDELGDLMAKAGYVPVIETDLHYVEH 394
           KKEPG SWIEV++K+H FIVGD SH + ++IY  L+ L   M  AGY+P     LH VE 
Sbjct: 233 KKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEE 292

Query: 395 REKELLLAHHSEKLALAFGLLVTPEGAPIRIKKNLRICVDCHTAFKFICEIVSRAIIVRD 574
            +KE +L HHSEKLA+AFG++ TP G  IR+ KNLR+C DCHTA KFI  IVSR I++RD
Sbjct: 293 EQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRD 352

Query: 575 NNRFHHFSDGSCSCGDYW 628
            +RFHHF DG CSCGDYW
Sbjct: 353 THRFHHFKDGQCSCGDYW 370



 Score = 88.6 bits (218), Expect(2) = 3e-64
 Identities = 37/68 (54%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   PFEPNAAVWGALLGAARIHKNVELGQHAAEMLLTYHPEKSGTHVLLSNMYASVGSWENVA 182
           P EPNA+VWG+LLGA R+H N+EL + A E L+   PE  GT+VLLSN+YA+ G W++  
Sbjct: 162 PVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAG 221

Query: 183 KTRRLMKE 206
           K R++MK+
Sbjct: 222 KVRKMMKD 229


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score =  185 bits (469), Expect(2) = 5e-64
 Identities = 87/138 (63%), Positives = 104/138 (75%)
 Frame = +2

Query: 215 KKEPGMSWIEVKDKIHTFIVGDRSHSRTKDIYGKLDELGDLMAKAGYVPVIETDLHYVEH 394
           +K+PG SWIEVK+K+HTF+V D+SH +T++IY  L+EL   M  AGYVP     LH VE 
Sbjct: 109 QKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNFVLHDVEM 168

Query: 395 REKELLLAHHSEKLALAFGLLVTPEGAPIRIKKNLRICVDCHTAFKFICEIVSRAIIVRD 574
            +KE  L HHSEKLA+AFGL+ T  G P+RI KNLR+C DCHTA KFI +IV R II+RD
Sbjct: 169 EQKEHSLYHHSEKLAIAFGLISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIRD 228

Query: 575 NNRFHHFSDGSCSCGDYW 628
            NRFHHF DG CSCGDYW
Sbjct: 229 ANRFHHFKDGLCSCGDYW 246



 Score = 86.3 bits (212), Expect(2) = 5e-64
 Identities = 37/68 (54%), Positives = 52/68 (76%)
 Frame = +3

Query: 3   PFEPNAAVWGALLGAARIHKNVELGQHAAEMLLTYHPEKSGTHVLLSNMYASVGSWENVA 182
           PF P+A VWGALLGA R++ N++LG+HAAE L    P  +  +VLLSN+YA+ G W++VA
Sbjct: 38  PFAPDANVWGALLGACRMYGNIDLGKHAAECLFQLEPHNAAKYVLLSNIYAAAGRWDDVA 97

Query: 183 KTRRLMKE 206
           K R++MK+
Sbjct: 98  KVRKIMKD 105


>tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  181 bits (458), Expect(2) = 3e-63
 Identities = 85/138 (61%), Positives = 101/138 (73%)
 Frame = +2

Query: 215  KKEPGMSWIEVKDKIHTFIVGDRSHSRTKDIYGKLDELGDLMAKAGYVPVIETDLHYVEH 394
            KK PG SWIEV++K+HTF VGD  H   +DIY  L++L   M KAGYV   +  LH VE 
Sbjct: 687  KKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEE 746

Query: 395  REKELLLAHHSEKLALAFGLLVTPEGAPIRIKKNLRICVDCHTAFKFICEIVSRAIIVRD 574
             EKE +L +HSEKLA+A+G+L  P G PIR+ KNLR+C DCHTAFK I  I  R II+RD
Sbjct: 747  EEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRD 806

Query: 575  NNRFHHFSDGSCSCGDYW 628
            +NRFHHF DGSCSCGDYW
Sbjct: 807  SNRFHHFRDGSCSCGDYW 824



 Score = 87.8 bits (216), Expect(2) = 3e-63
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = +3

Query: 3   PFEPNAAVWGALLGAARIHKNVELGQHAAEMLLTYHPEKSGTHVLLSNMYASVGSWENVA 182
           PFEP++ +WGALLGA+RIH+N ELG++AAE +    PE +G +VLLSN+YAS G W +V 
Sbjct: 616 PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVD 675

Query: 183 KTRRLMKE 206
           K R +M E
Sbjct: 676 KMRHIMHE 683


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  246 bits (627), Expect = 5e-63
 Identities = 121/183 (66%), Positives = 141/183 (77%), Gaps = 6/183 (3%)
 Frame = +2

Query: 98   FNLPPRKIWYSCSSFEHVCISGIVGKCSENEKVDE------RNQRKKEPGMSWIEVKDKI 259
            F L P K      S  HV ++ I     + E V E       ++ KKEPGMSWIEVKDK+
Sbjct: 757  FILEPEK------SGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKV 810

Query: 260  HTFIVGDRSHSRTKDIYGKLDELGDLMAKAGYVPVIETDLHYVEHREKELLLAHHSEKLA 439
            +TF+VGDRSH R+++IY KLDEL DLM KAGYVP++E DLH VE  EKELLL HHSEKLA
Sbjct: 811  YTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLA 870

Query: 440  LAFGLLVTPEGAPIRIKKNLRICVDCHTAFKFICEIVSRAIIVRDNNRFHHFSDGSCSCG 619
            +AFGL+ TP+GAPIR+KKNLR+CVDCHTAFK+IC+IVSR IIVRD NRFHHF DGSCSCG
Sbjct: 871  VAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCG 930

Query: 620  DYW 628
            DYW
Sbjct: 931  DYW 933



 Score =  112 bits (279), Expect = 1e-22
 Identities = 52/70 (74%), Positives = 61/70 (87%)
 Frame = +3

Query: 3   PFEPNAAVWGALLGAARIHKNVELGQHAAEMLLTYHPEKSGTHVLLSNMYASVGSWENVA 182
           PFE NA+VWGALLGAARIHK+VELG+ AAEML    PEKSGTHVLL+N+YAS G WENVA
Sbjct: 725 PFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVA 784

Query: 183 KTRRLMKETK 212
           + RRLM+++K
Sbjct: 785 EVRRLMRDSK 794


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