BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037239
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   126   4e-40
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   132   2e-39
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...   121   2e-36
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li...   114   2e-29
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   103   4e-26

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  126 bits (316), Expect(2) = 4e-40
 Identities = 68/104 (65%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
 Frame = +3

Query: 54  MEEEIKAEFKKNGFSL--DDEEEILKKCLTFCIEFKLSPSDLVSSWDVFSLNRGL-ELTV 224
           MEEEI  EFKK GFS   ++EEE+LKKCLTFCI +KLSPSDLVSSW+V+ LNR L E  V
Sbjct: 1   MEEEIMLEFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVV 60

Query: 225 QSAHMGAFLQQLQNEQRDAIIKKEPGLHFYSS-DVAMLLNDEYE 353
            +A M  FL  LQNEQ++A+IK+EP LH YSS DV M+L+DE+E
Sbjct: 61  GNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHE 104



 Score = 64.7 bits (156), Expect(2) = 4e-40
 Identities = 35/74 (47%), Positives = 46/74 (62%)
 Frame = +1

Query: 424 LLNDEYEDTKEGVLHTPAPAHQRETLKTEQSDSAQKTNGSIFGSKKLLESVTPFGQRKSK 603
           +L+DE+E+ KE +L TP+    R     +  DSAQ+TNG+     K    VTPFG+R SK
Sbjct: 98  ILSDEHEEIKEDILGTPSDRSGRH--HADPFDSAQRTNGNSSSYGKPSNHVTPFGKRTSK 155

Query: 604 FVVQFTLNEPTKAE 645
           FVVQ T+N P  AE
Sbjct: 156 FVVQLTVNNPPSAE 169


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  132 bits (331), Expect(2) = 2e-39
 Identities = 71/103 (68%), Positives = 82/103 (79%), Gaps = 3/103 (2%)
 Frame = +3

Query: 54  MEEEIKAEFKKNGFSLDDEEE-ILKKCLTFCIEFKLSPSDLVSSWDVFSLNRGL-ELTVQ 227
           MEEEIKAEF K+GF+LD EEE ILKKCLTFCI + L P+DLVSSW+V+ LNR L E TVQ
Sbjct: 1   MEEEIKAEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQ 60

Query: 228 SAHMGAFLQQLQNEQRDAIIKKEPGLHFYSS-DVAMLLNDEYE 353
           +  M  FL  LQNEQ++AIIK+EP LH YSS DV M+LNDE E
Sbjct: 61  NGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGE 103



 Score = 56.6 bits (135), Expect(2) = 2e-39
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = +1

Query: 424 LLNDEYEDTKEGVLHTPAPAHQRETLKTEQSDSAQKTNGSIFGSKKLLESVTPFGQRKSK 603
           +LNDE ED KE V  TP    Q+  L +E  DS  K+ G+ + S K  + VTPFG+R  K
Sbjct: 97  ILNDEGEDLKEEVPGTPTDESQK--LNSEPFDSIIKSTGNGYSSGKRSKHVTPFGRRTDK 154

Query: 604 FVVQFTLN 627
           FVV+F +N
Sbjct: 155 FVVKFNIN 162


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
           gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
           polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score =  121 bits (304), Expect(2) = 2e-36
 Identities = 60/102 (58%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
 Frame = +3

Query: 54  MEEEIKAEFKKNGFSLDDEEEILKKCLTFCIEFKLSPSDLVSSWDVFSLNRGLE-LTVQS 230
           MEEEI  EFK++GF+ D+EEEILKKC+TFC+ + L PSD+VSSW+V+ LNR L+   V+ 
Sbjct: 1   MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 60

Query: 231 AHMGAFLQQLQNEQRDAIIKKEPGLHFYSS-DVAMLLNDEYE 353
             +  FLQ LQNEQ++ +IK EP LH YSS DV ++LNDE E
Sbjct: 61  EQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENE 102



 Score = 56.6 bits (135), Expect(2) = 2e-36
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 424 LLNDEYEDTKEGVLHTPAPAHQRETLKTEQSDSAQKTNGSIFGSKKLLESVTPFGQRKSK 603
           +LNDE ED  E +L TP    Q  +L  E+ D    TN  +F S K  +  TPFGQR  K
Sbjct: 96  ILNDENEDLNEDILKTPNGKSQ--SLHKERLDLTPYTNEGLFSSGKPSKHETPFGQRTEK 153

Query: 604 FVVQFTLNE-PTKAEAISIE 660
           FVV+F +N  P    A+ ++
Sbjct: 154 FVVRFNINNMPDMVTAVKVD 173


>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
          Length = 606

 Score =  114 bits (284), Expect(2) = 2e-29
 Identities = 57/102 (55%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
 Frame = +3

Query: 54  MEEEIKAEFKKNGFSLDDEEEILKKCLTFCIEFKLSPSDLVSSWDVFSLNRGL-ELTVQS 230
           MEE+IK+EFK++GF L+DE+EIL KC+T+CI + L+PSDLVSSW+V+ LNR L E  VQ+
Sbjct: 1   MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQN 60

Query: 231 AHMGAFLQQLQNEQRDAII--KKEPGLHFYS-SDVAMLLNDE 347
             +  FL  LQNE+++ +I  K+E GLH YS  DV M+LN++
Sbjct: 61  TEIDGFLLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNND 102



 Score = 40.8 bits (94), Expect(2) = 2e-29
 Identities = 25/80 (31%), Positives = 38/80 (47%)
 Frame = +1

Query: 424 LLNDEYEDTKEGVLHTPAPAHQRETLKTEQSDSAQKTNGSIFGSKKLLESVTPFGQRKSK 603
           +LN++ +DTK+    TP   HQ        + S    N    G     + +TPF +R  K
Sbjct: 98  ILNND-DDTKDNTPGTPINHHQDPLSPALDTTSLMYENVLSSGKPSKSKLITPFSKRTDK 156

Query: 604 FVVQFTLNEPTKAEAISIEE 663
           FVV+F++N   K E    +E
Sbjct: 157 FVVKFSINTVPKVEKAENDE 176


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  103 bits (256), Expect(2) = 4e-26
 Identities = 53/102 (51%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
 Frame = +3

Query: 57  EEEIKAEFKKNGFSLDDEEEILKKCLTFCIEFKLSPSDLVSSWDVFSLNRG-LELTVQSA 233
           +EEIK EFK++GF+L +E++ILK+C+T CI + L+PSDLVSSW+++ LNR  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFTLVEEDDILKRCVTLCINYSLNPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 234 HMGAFLQQLQNEQRDAIIK-KEPGLHFYSS-DVAMLLNDEYE 353
            M  F+  LQNEQ+++I++ +E GLH YS+ DV MLL+   E
Sbjct: 64  EMDGFVLHLQNEQKESIMRAEEAGLHLYSNRDVDMLLDGVQE 105



 Score = 40.8 bits (94), Expect(2) = 4e-26
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +1

Query: 424 LLNDEYEDTKEGVLHTPAPAHQRETLKTEQSDSAQKTNGSIFGSKKLLESVTPFGQRKSK 603
           LL+   EDT+E V     P ++ + L  +  DS  ++    + + K +  VTPFG R  K
Sbjct: 99  LLDGVQEDTEEIVT---TPTNESQRLHPDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEK 155

Query: 604 FVVQFTLNEPTKAE 645
           FVV+F +     AE
Sbjct: 156 FVVKFNVGNVAPAE 169