BLASTX nr result
ID: Cephaelis21_contig00037232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00037232
(444 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi... 177 8e-43
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi... 173 2e-41
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ... 170 1e-40
ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|2... 169 3e-40
ref|XP_002879637.1| pentatricopeptide repeat-containing protein ... 162 2e-38
>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 177 bits (449), Expect = 8e-43
Identities = 82/147 (55%), Positives = 110/147 (74%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
SLLFAY ++G FD+A F MPK+V +AWN MISG+ + G+VELC LFK+M ED+ +P
Sbjct: 142 SLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQP 201
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
DQ T S+L+NA E SY MMH FI+KSGW AVEVSNSI+S Y++ GC+++++K+
Sbjct: 202 DQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVF 261
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ +G L QVSWNA+IDAHMK G++ A
Sbjct: 262 ESIGILTQVSWNAMIDAHMKIGDTHEA 288
Score = 77.0 bits (188), Expect = 1e-12
Identities = 39/136 (28%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
+++ A++ G A F P++ +V+W +MI+G+A+NG E F +M+E+ +P
Sbjct: 274 AMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQP 333
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFG-CQNEILKM 359
D T ++++AC+ + + M+H I+ G+ + V+V N +++ YA+ G Q
Sbjct: 334 DDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAF 393
Query: 360 VQCVGTLNQVSWNAII 407
+ +G + VSWNA++
Sbjct: 394 KEILGK-DLVSWNAML 408
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/142 (27%), Positives = 70/142 (49%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
S + A G A F MP + VAWN M++ +++ G + LF M RP
Sbjct: 10 SKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRP 69
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
D+ T ++ ++ACA +H+ +V SG S++ V NS+I Y + ++
Sbjct: 70 DRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVF 129
Query: 363 QCVGTLNQVSWNAIIDAHMKTG 428
+ + +N+VSW +++ A+ +G
Sbjct: 130 EEMSIMNEVSWCSLLFAYTSSG 151
>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Glycine max]
Length = 629
Score = 173 bits (438), Expect = 2e-41
Identities = 79/147 (53%), Positives = 104/147 (70%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
SL+FAY N+ +A F +MP+RV++AWN MI GHA+ GEVE C LFK+M C+P
Sbjct: 144 SLMFAYANSCRLGVALELFRSMPERVVIAWNIMIVGHARRGEVEACLHLFKEMCGSLCQP 203
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
DQ T S+L+NACA Y M+H F++KSGWSSA+EV NS++S YA+ CQ++ +K+
Sbjct: 204 DQWTFSALINACAVSMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVF 263
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
G NQVSWNAIIDAHMK G++Q A
Sbjct: 264 NSFGCFNQVSWNAIIDAHMKLGDTQKA 290
Score = 67.8 bits (164), Expect = 9e-10
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = +3
Query: 9 LFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRPDQ 188
+ A +G A F +P + VAWN M++ ++ G + LF M +PD
Sbjct: 12 IVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGCMRISHSKPDN 71
Query: 189 CTLSSLMN--ACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
+ S+++N ACA S + + +H+ +V SG+ S++ V+NS+I Y + ++ K+
Sbjct: 72 FSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVF 131
Query: 363 QCVGTLNQVSWNAIIDAH 416
N+V+W +++ A+
Sbjct: 132 DETSDSNEVTWCSLMFAY 149
Score = 67.8 bits (164), Expect = 9e-10
Identities = 36/147 (24%), Positives = 74/147 (50%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
+++ A++ G A F P+R +V+W +MI+G+ +NG EL +F + ++ +
Sbjct: 276 AIIDAHMKLGDTQKAFLAFQKAPERNIVSWTSMIAGYTRNGNGELALSMFLDLTRNSVQL 335
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
D ++++ACA + + M+H I++ G + V NS+++ YA+ G
Sbjct: 336 DDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAF 395
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ + +SWN+++ A G + A
Sbjct: 396 HDILDKDLISWNSMLFAFGLHGRANEA 422
>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510628|gb|AES91770.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 665
Score = 170 bits (430), Expect = 1e-40
Identities = 79/147 (53%), Positives = 105/147 (71%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
SLLFAY N FD+A F +MP++V +AWN +I+ HA+ GEVE C LFK+M E+ +P
Sbjct: 143 SLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQP 202
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
DQ T S+LM+AC E S + MMH F++KSGWS+A+EV+NSI+S YA+ C + +K+
Sbjct: 203 DQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVF 262
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
G NQVSWNAIIDAHMK G++Q A
Sbjct: 263 NSGGAFNQVSWNAIIDAHMKVGDTQKA 289
Score = 80.1 bits (196), Expect = 2e-13
Identities = 42/143 (29%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQM--LEDAC 176
S + + +G A F MP+R VAWN M++ +++ G + F+LF M + D+
Sbjct: 10 SEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDS- 68
Query: 177 RPDQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILK 356
+PD + S+ +N+CA S+ + + +HS +V SG+ S++ V+N++I Y + N+ K
Sbjct: 69 KPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARK 128
Query: 357 MVQCVGTLNQVSWNAIIDAHMKT 425
+ + N+V+W +++ A+ T
Sbjct: 129 VFDEMNYSNEVTWCSLLFAYANT 151
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/147 (26%), Positives = 74/147 (50%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
+++ A++ G A F P++ +V+W +MI G+ +NG +L LF M ++ +
Sbjct: 275 AIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQL 334
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
D ++++ACA + + M+HS I+ G + V NS+I+ YA+ G +
Sbjct: 335 DDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLAL 394
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ + + VSWN+++ A G A
Sbjct: 395 RGINDKDLVSWNSMLFAFGLNGRGNEA 421
>ref|XP_002314475.1| predicted protein [Populus trichocarpa] gi|222863515|gb|EEF00646.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 169 bits (427), Expect = 3e-40
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
SLLFAY N+G FD A S F +MPK+V VAWN MISG + GE+ELC E+FK+M E C P
Sbjct: 11 SLLFAYTNSGQFDAAASVFKSMPKKVDVAWNIMISGLGQYGEIELCLEMFKEMRESLCEP 70
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
DQ T S+L++A E Y MMH+ ++K+GWSSA+E +NSI+S YA+ G N+ +K+
Sbjct: 71 DQWTYSALISAFTESLELVYGCMMHAVVIKTGWSSAMEANNSILSFYAKLGSLNDAVKVF 130
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ +GTL QVSWNAIID MK G++ A
Sbjct: 131 ESMGTLTQVSWNAIIDVFMKAGDTSEA 157
Score = 69.7 bits (169), Expect = 2e-10
Identities = 30/111 (27%), Positives = 64/111 (57%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
+++ ++ AG A +F MP + +V+W +MI+G+A+NG E + F M+ + P
Sbjct: 143 AIIDVFMKAGDTSEAFLSFQRMPDKNVVSWTSMITGYARNGYGEEALDFFVGMIRNCLLP 202
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFG 335
D T ++++AC+ + + M+H +++ G+ + V + N +++ YA+ G
Sbjct: 203 DDFTFGAVLHACSSLAILGHGRMVHGCVIRHGFHAHVYIGNGLVNMYAKCG 253
>ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325476|gb|EFH55896.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 624
Score = 162 bits (411), Expect = 2e-38
Identities = 77/147 (52%), Positives = 104/147 (70%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
SLLFAY+NA F+ A F MPKRV AWN MISGHA+ G++E C LFK+MLE P
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCGKIESCLRLFKEMLESEFEP 202
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
D T SSLMNACA+ SN Y M+H+ +V++GW SAVE NS++S YA+ GC++++++ +
Sbjct: 203 DCFTFSSLMNACADSSNVVYGWMVHAVMVRNGWYSAVEAKNSVLSFYAKLGCKDDVMREL 262
Query: 363 QCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ + L QVSWN+IIDA +K G + A
Sbjct: 263 ESIEVLTQVSWNSIIDACVKVGETDKA 289
Score = 72.8 bits (177), Expect = 3e-11
Identities = 36/137 (26%), Positives = 69/137 (50%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
S++ A V G D A F P++ +V W TMI+G+ +NG+ E F +M++
Sbjct: 275 SIIDACVKVGETDKALEVFRLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDS 334
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFGCQNEILKMV 362
D ++++AC+ + + M+H ++ G+ V N++++ YA+ G E +
Sbjct: 335 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAF 394
Query: 363 QCVGTLNQVSWNAIIDA 413
+ + VSWN ++ A
Sbjct: 395 GDIANKDLVSWNTMLFA 411
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +3
Query: 3 SLLFAYVNAGHFDIANSTFSAMPKRVLVAWNTMISGHAKNGEVELCFELFKQMLEDACRP 182
S + + +G A F M R VAWNTM++ ++ G + LF Q+ +P
Sbjct: 9 SKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFSDSKP 68
Query: 183 DQCTLSSLMNACAEGSNSSYDSMMHSFIVKSGWSSAVEVSNSIISAYARFG---CQNEIL 353
D + +++++ C N + S +++SG+ ++ V+NS+I Y + N++
Sbjct: 69 DDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSANKVF 128
Query: 354 KMVQCVGTLNQVSWNAIIDAHMKTGNSQAA 443
+ + C + N+V+W +++ A+M +AA
Sbjct: 129 RDM-CCHSRNEVTWCSLLFAYMNAEQFEAA 157