BLASTX nr result

ID: Cephaelis21_contig00037219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037219
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...    86   3e-15
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]         86   3e-15
ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...    85   7e-15
ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleop...    80   1e-13

>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = +3

Query: 138 YTKSNVRKVKLRSTLAALLDNPILADVPKKPTLSDVDTLISLDLGSAMRISVLK 299
           Y  SNV+K KL+STLAALLD+PIL+DVPKKPTLSDVDTLISL++GSAMRISV K
Sbjct: 14  YNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMRISVQK 67


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = +3

Query: 138 YTKSNVRKVKLRSTLAALLDNPILADVPKKPTLSDVDTLISLDLGSAMRISVLK 299
           Y  +NV+KV+L STLAALLD+PILADVPK PTLS VDTLISL+LGSAMRISVLK
Sbjct: 22  YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLK 75


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = +3

Query: 138 YTKSNVRKVKLRSTLAALLDNPILADVPKKPTLSDVDTLISLDLGSAMRISVLK 299
           Y  +NV+KV+L STLAALLD+PILADVPK PTLS VDTLISL+LGSAMRISVLK
Sbjct: 22  YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLK 75


>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = +3

Query: 138 YTKSNVRKVKLRSTLAALLDNPILADVPKKPTLSDVDTLISLDLGSAMRISVLK 299
           Y  +NV+K +L STL ALLD+PILADVPK+PTLSDVDTLI+L+LGSAMRISV+K
Sbjct: 17  YNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISVIK 70


>ref|XP_003538972.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Glycine max]
          Length = 187

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/55 (70%), Positives = 47/55 (85%)
 Frame = +3

Query: 135 EYTKSNVRKVKLRSTLAALLDNPILADVPKKPTLSDVDTLISLDLGSAMRISVLK 299
           EY KS+V+K +L S L  LLD+PIL+DVPK PT +DVDTLI+L+LGSAMRISVLK
Sbjct: 27  EYNKSSVKKARLNSLLTTLLDDPILSDVPKNPTFADVDTLINLELGSAMRISVLK 81


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