BLASTX nr result

ID: Cephaelis21_contig00037155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037155
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    74   1e-11
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            74   1e-11
gb|AAC24057.1| Contains similarity to reverse transcriptase-like...    72   4e-11
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 70   2e-10
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    69   3e-10

>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/93 (43%), Positives = 51/93 (54%)
 Frame = -3

Query: 283 GVSALDSVDILAFIGI*EGVFLVRYLRIPLLAGRLQVMHYRPFIDRIIQQIGLWTASFFS 104
           GV   D  DIL       G   VRYL +PLL  ++    Y P +++I  +IG WTA   S
Sbjct: 3   GVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLS 62

Query: 103 FAGRLQLITVVFRRI*CFWLSLLSVPSGVIDEI 5
           FAGRLQLI+ V   +  FW+S   +PS  I EI
Sbjct: 63  FAGRLQLISSVIHSLTNFWMSAFRLPSACIKEI 95


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/93 (43%), Positives = 51/93 (54%)
 Frame = -3

Query: 283 GVSALDSVDILAFIGI*EGVFLVRYLRIPLLAGRLQVMHYRPFIDRIIQQIGLWTASFFS 104
           GV   D  DIL       G   VRYL +PLL  ++    Y P +++I  +IG WTA   S
Sbjct: 3   GVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLS 62

Query: 103 FAGRLQLITVVFRRI*CFWLSLLSVPSGVIDEI 5
           FAGRLQLI+ V   +  FW+S   +PS  I EI
Sbjct: 63  FAGRLQLISSVIHSLTNFWMSAFRLPSACIKEI 95


>gb|AAC24057.1| Contains similarity to reverse transcriptase-like protein
           gb|2244803 from A. thaliana chromosome 4 contig
           gb|Z97336 [Arabidopsis thaliana]
          Length = 404

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/96 (41%), Positives = 53/96 (55%)
 Frame = -3

Query: 292 FIIGVSALDSVDILAFIGI*EGVFLVRYLRIPLLAGRLQVMHYRPFIDRIIQQIGLWTAS 113
           F+ G SA     I +      G   VRYL +PL+  RL    Y P +++I Q+IG WTA 
Sbjct: 37  FLAGTSATAHQTITSTYPFSVGTLPVRYLGLPLVNKRLSAADYLPLLEKIRQRIGSWTAR 96

Query: 112 FFSFAGRLQLITVVFRRI*CFWLSLLSVPSGVIDEI 5
           F SFAGRL LI+ V   I  FW++   +P G I E+
Sbjct: 97  FLSFAGRLNLISSVLWSICNFWMAAFRLPRGCIREV 132


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/96 (38%), Positives = 54/96 (56%)
 Frame = -3

Query: 292 FIIGVSALDSVDILAFIGI*EGVFLVRYLRIPLLAGRLQVMHYRPFIDRIIQQIGLWTAS 113
           ++ GVS L+  +IL+      G   VRYL +PLL  ++    Y P +D++  +I  WTA 
Sbjct: 317 YLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTAR 376

Query: 112 FFSFAGRLQLITVVFRRI*CFWLSLLSVPSGVIDEI 5
             S+AGRL LI  V   +  FW+S   +P+G I EI
Sbjct: 377 SLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEI 412


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 FIIGVSALDSVDILAFIGI*EGVFLVRYLRIPLLAGRLQVMHYRPFIDRIIQQIGLWTAS 113
           F++GV++  +  + A +G   G   VRYL +PLL GRLQ     P I RI  +I  W+A 
Sbjct: 11  FLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSAR 70

Query: 112 FFSFAGRLQLITVVFRRI*CFWLSLLSVPSGV---IDEIV 2
             SFAGRLQL+  V R +  +W S+  +P  V   +D+I+
Sbjct: 71  VLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKIL 110


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