BLASTX nr result

ID: Cephaelis21_contig00037003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00037003
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi...   141   2e-31
emb|CBI27247.3| unnamed protein product [Vitis vinifera]              141   2e-31
ref|XP_002512033.1| pentatricopeptide repeat-containing protein,...   139   8e-31
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24

>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  145 bits (366), Expect = 1e-32
 Identities = 66/109 (60%), Positives = 86/109 (78%)
 Frame = +2

Query: 2   IQHYGCMVDLFGKAGLLGEAYEVIKMLPSEPNVVIWRSFLLYCKWYKQFEMFERVIDQIM 181
           IQHYGCMVD+FGKAGLL EAYEVIK +  EPN+VIW SFL  CK +KQF++ +RVI Q++
Sbjct: 323 IQHYGCMVDMFGKAGLLEEAYEVIKEMEFEPNIVIWGSFLSACKMHKQFDIADRVIGQVL 382

Query: 182 RTVRPENDGGVYSLIFDLYILRGKLGEAQRIRDYILNQNIGNTRRSRFI 328
           R ++PENDGG+YSL+ DLY+L  K  +A+R+R+ +LNQN+   R S  I
Sbjct: 383 RDIKPENDGGIYSLVSDLYVLNKKWDDAERVRNLVLNQNVRKARGSSCI 431


>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 324

 Score =  141 bits (355), Expect = 2e-31
 Identities = 65/109 (59%), Positives = 85/109 (77%)
 Frame = +2

Query: 2   IQHYGCMVDLFGKAGLLGEAYEVIKMLPSEPNVVIWRSFLLYCKWYKQFEMFERVIDQIM 181
           IQH+GCMVDLFGKAGLL EAYE+I  +  EPNVV+W SFL  CK +KQFE+ ERV +Q++
Sbjct: 211 IQHFGCMVDLFGKAGLLEEAYEIINSMKLEPNVVLWSSFLSSCKVHKQFELAERVTEQVL 270

Query: 182 RTVRPENDGGVYSLIFDLYILRGKLGEAQRIRDYILNQNIGNTRRSRFI 328
           RTV+PENDGGVY+LI +L++L  K  +A+R+R  ++NQ +   R S FI
Sbjct: 271 RTVKPENDGGVYTLISNLFVLNDKWDDAERVRKLMVNQKVRKARGSSFI 319


>emb|CBI27247.3| unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  141 bits (355), Expect = 2e-31
 Identities = 65/109 (59%), Positives = 85/109 (77%)
 Frame = +2

Query: 2   IQHYGCMVDLFGKAGLLGEAYEVIKMLPSEPNVVIWRSFLLYCKWYKQFEMFERVIDQIM 181
           IQH+GCMVDLFGKAGLL EAYE+I  +  EPNVV+W SFL  CK +KQFE+ ERV +Q++
Sbjct: 155 IQHFGCMVDLFGKAGLLEEAYEIINSMKLEPNVVLWSSFLSSCKVHKQFELAERVTEQVL 214

Query: 182 RTVRPENDGGVYSLIFDLYILRGKLGEAQRIRDYILNQNIGNTRRSRFI 328
           RTV+PENDGGVY+LI +L++L  K  +A+R+R  ++NQ +   R S FI
Sbjct: 215 RTVKPENDGGVYTLISNLFVLNDKWDDAERVRKLMVNQKVRKARGSSFI 263


>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 319

 Score =  139 bits (350), Expect = 8e-31
 Identities = 65/109 (59%), Positives = 83/109 (76%)
 Frame = +2

Query: 2   IQHYGCMVDLFGKAGLLGEAYEVIKMLPSEPNVVIWRSFLLYCKWYKQFEMFERVIDQIM 181
           IQHYGCMVDLFGKAGLL EAY VIK +  E NVVIW SFL  CK +K+F+M ERVI+Q++
Sbjct: 211 IQHYGCMVDLFGKAGLLDEAYNVIKTMKVENNVVIWGSFLSACKEHKKFDMAERVIEQVL 270

Query: 182 RTVRPENDGGVYSLIFDLYILRGKLGEAQRIRDYILNQNIGNTRRSRFI 328
           + ++PENDGG+Y+L+ DLY    K  +A+R+R  +LNQN+   R S FI
Sbjct: 271 KVIKPENDGGIYTLVCDLYTSNEKWDDAERVRKLMLNQNVRKARGSSFI 319


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 436

 Score =  117 bits (294), Expect = 2e-24
 Identities = 55/104 (52%), Positives = 76/104 (73%)
 Frame = +2

Query: 2   IQHYGCMVDLFGKAGLLGEAYEVIKMLPSEPNVVIWRSFLLYCKWYKQFEMFERVIDQIM 181
           IQHYGC VDL G++GLL EAY VIK +  EPNV++W S L  CK +K F++ ERVI+QI+
Sbjct: 325 IQHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLAERVIEQIL 384

Query: 182 RTVRPENDGGVYSLIFDLYILRGKLGEAQRIRDYILNQNIGNTR 313
             + P+N  GVYSL+ DLY+L+ K  +A+ IR+ +LNQ++   R
Sbjct: 385 EKIEPDNHAGVYSLVSDLYVLQDKWDDAENIRN-LLNQHVRKGR 427


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