BLASTX nr result

ID: Cephaelis21_contig00036952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036952
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_973653.1| F-box protein [Arabidopsis thaliana] gi|3302548...    63   2e-08
ref|NP_181623.2| F-box protein [Arabidopsis thaliana] gi|1222150...    63   2e-08
gb|AAO37211.1| hypothetical protein [Arabidopsis thaliana]             61   9e-08
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    60   2e-07

>ref|NP_973653.1| F-box protein [Arabidopsis thaliana] gi|330254801|gb|AEC09895.1|
           F-box protein [Arabidopsis thaliana]
          Length = 442

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = -3

Query: 526 MRFKCVSRIWRSIITDPSFAPA-YRGGFRGLLLFEPSCRLATGRYFFYASLDGHPNNHFS 350
           +RFKC+S+ W S+I+   F  + +    R        C +  G      SL     ++  
Sbjct: 80  VRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPHIHMCLVDHGGQRVLLSLSSTSPDNTC 139

Query: 349 HHLTIDHGGKAMG--HTEIVNGLLCFYYRQYSCLYNLATRERLQLPFSAGDV----SKSK 188
           + +  D     MG     +V GLLCF  R+ +C+YN  TR+RL LP    D+     + K
Sbjct: 140 YVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIALKDERK 199

Query: 187 ACSYHFGYDPVNKLYKLL 134
              Y+ G+DPVN  YKL+
Sbjct: 200 DIRYYIGHDPVNDQYKLV 217


>ref|NP_181623.2| F-box protein [Arabidopsis thaliana]
           gi|122215015|sp|Q3EBI7.1|FB130_ARATH RecName: Full=F-box
           protein At2g40910 gi|330254802|gb|AEC09896.1| F-box
           protein [Arabidopsis thaliana]
          Length = 449

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = -3

Query: 526 MRFKCVSRIWRSIITDPSFAPA-YRGGFRGLLLFEPSCRLATGRYFFYASLDGHPNNHFS 350
           +RFKC+S+ W S+I+   F  + +    R        C +  G      SL     ++  
Sbjct: 87  VRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPHIHMCLVDHGGQRVLLSLSSTSPDNTC 146

Query: 349 HHLTIDHGGKAMG--HTEIVNGLLCFYYRQYSCLYNLATRERLQLPFSAGDV----SKSK 188
           + +  D     MG     +V GLLCF  R+ +C+YN  TR+RL LP    D+     + K
Sbjct: 147 YVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIALKDERK 206

Query: 187 ACSYHFGYDPVNKLYKLL 134
              Y+ G+DPVN  YKL+
Sbjct: 207 DIRYYIGHDPVNDQYKLV 224


>gb|AAO37211.1| hypothetical protein [Arabidopsis thaliana]
          Length = 442

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = -3

Query: 526 MRFKCVSRIWRSIITDPSFAPA-YRGGFRGLLLFEPSCRLATGRYFFYASLDGHPNNHFS 350
           +RFKC+S+ W S+I+   F  + +    R        C +  G      SL     ++  
Sbjct: 80  VRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPHIHMCLVDHGGQRVLLSLSSTSPDNTC 139

Query: 349 HHLTIDHGGKAMG--HTEIVNGLLCFYYRQYSCLYNLATRERLQLPFSAGDV----SKSK 188
           + +  D     MG     +V GLLCF  R+ +C+YN  TR+RL LP +  D+     + K
Sbjct: 140 YVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTRQRLTLPATKSDIIALKDERK 199

Query: 187 ACSYHFGYDPVNKLYKLL 134
              Y+  +DPVN  YKL+
Sbjct: 200 DIRYYIEHDPVNDQYKLV 217


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
 Frame = -3

Query: 526 MRFKCVSRIWRSIITDPSFAPAY------RGGFRGLLLFEPSCRLATGRYFFYASLDGHP 365
           +RF+CVSR W S   DP FA  +      R     LLL  P    ++  + F+    G  
Sbjct: 44  VRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGSALLLSYPDPSSSSTSFSFFERKQGFR 103

Query: 364 NNHFSHHLTIDHGGKAMGH-TEIVNGLLCFYYRQYS--CLYNLATRERLQLPFSAGDVSK 194
           N      L I H  +   H +EI+ G+LC  YR+     + N+ T+E + LP S     +
Sbjct: 104 N------LQISHVDQQYTHLSEIIRGILCINYRRSHRVDICNITTQETITLPRSTNIPIR 157

Query: 193 SKA---------CSYHFGYDPVNKLYKLLKIYPV--YEVDQDNDDTDLEYMDANFVQNLN 47
           S A           Y FG++   + YK+L I  +  Y++ Q N +  L   + +  + + 
Sbjct: 158 SDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSITRYKL-QVNPNNGLSTREVS-QRTVE 215

Query: 46  CEILTIGLDL---SWR 8
            EI TIG D    SWR
Sbjct: 216 FEIFTIGCDRGAGSWR 231


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 23/162 (14%)
 Frame = -3

Query: 526 MRFKCVSRIWRSIITDPSFAPAYRG-GFRGLLLFEPSCRLATGRYFFYASLDGHPN--NH 356
           ++F+ V + WRS+I+DPSF  A++      LL+  P  R  +GR   ++  DG     + 
Sbjct: 39  LQFRSVCKSWRSMISDPSFVEAHQSRSATTLLISFPDTRRPSGRRHLFSISDGEARQLSG 98

Query: 355 FSHHLTIDHGGKAMGHTEIVNGLLCFY-----------YRQYSCLYNLATRERLQLP--- 218
           FSH            +++ VNGL+C Y           +R   C  N +T ER+ LP   
Sbjct: 99  FSH----------WNNSQSVNGLICIYEQLVPSSPKLSFRVIVC--NPSTGERVTLPPTH 146

Query: 217 FSAGDVSKSKACSYHFGYDPVNKLYKLLKIY------PVYEV 110
           FS  D S     +   G+DP  K YK+L+ +      P++E+
Sbjct: 147 FSKADFSFCHQ-NISLGFDPSTKTYKILRAWWGRYGGPIHEI 187


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