BLASTX nr result

ID: Cephaelis21_contig00036757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036757
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|ABI34321.1| RNase H family protein [Solanum demissum]               47   6e-07
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06
ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06

>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
 Frame = +1

Query: 151  VSWTPPTMGCFKVNIDGSSFGNPGLSGGGIVMRDSDANVVXXXXXXXXXXXXXXXELLAS 330
            V W+PPT+G FK N+DGSS G PGLSG G V+R+   +++               EL A 
Sbjct: 1075 VIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGILDSNIAELRAV 1134

Query: 331  QTTLILSLSK---HYAGFIIESDSKLLVDFIHLKAQCPWRY 444
               + LS S    H+    IESDS  ++ ++H     PW +
Sbjct: 1135 VKAVELSASNRLLHHKHITIESDSTNVISWMHNPHNRPWMH 1175


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 46.6 bits (109), Expect(2) = 6e-07
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +1

Query: 151  VSWTPPTMGCFKVNIDGS-SFGNPGLSGGGIVMRDSDANVVXXXXXXXXXXXXXXXELLA 327
            V W  P + C K+N DGS S GN GL   G ++RD    ++               E LA
Sbjct: 745  VHWNTPNINCVKINTDGSFSSGNAGL---GWIVRDHTRRMIMAFSIPSSCSSNNLAEALA 801

Query: 328  SQTTLILSLSKHYAGFIIESDSKLLVDFI 414
            ++  ++  L + +    +E DSKL+VD +
Sbjct: 802  ARFGILWCLQQGFHNCYLELDSKLVVDMV 830



 Score = 32.7 bits (73), Expect(2) = 6e-07
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = +3

Query: 447  QSLIEYLQFVVSSQSCIIHICWK-VNSVADSLAKLATTSGSSQSYTAFTLSRHIQALA-- 617
            + ++E +  VV+  +C ++ C++  N VAD+LAK A  S  +  Y  +   R I  LA  
Sbjct: 841  KGVVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNEAHMYHDW---RDIPKLAVG 897

Query: 618  --RMDQLMYP*LRI 653
              ++D++  P +RI
Sbjct: 898  SYQLDKMQMPSIRI 911


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = +1

Query: 151 VSWTPPTMGCFKVNIDGSSFGNPGLSGGGIVMRDSDANVVXXXXXXXXXXXXXXXELLAS 330
           V W+PPT+G FK N+DGSS G PGLSG G V+R+   +++               EL A 
Sbjct: 589 VIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGILDSNIAELRAV 648

Query: 331 QTTLILSLSK---HYAGFIIESDS 393
              + LS S    H+    IESDS
Sbjct: 649 VKAVELSASNRLLHHKHITIESDS 672


>ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|222839453|gb|EEE77790.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = +1

Query: 157 WTPPTMGCFKVNIDGSSFGNPGLSGGGIVMRDSDANVVXXXXXXXXXXXXXXXELLASQT 336
           W+PP +   K N+DGSS G PG SG G V+R+   +++               EL A   
Sbjct: 82  WSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGIFSVPVGILDSNIAELRAIVK 141

Query: 337 TLILSLSK---HYAGFIIESDSKLLVDFIHLKAQCPWRYRN 450
            + LS S    H+   IIESDS   + +++     PW++ N
Sbjct: 142 AIELSASNCLFHHQHLIIESDSVNAISWMNKPHNRPWKHHN 182


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