BLASTX nr result

ID: Cephaelis21_contig00036676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036676
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]    251   1e-64
ref|NP_001078759.1| pentatricopeptide repeat-containing protein ...   250   2e-64
ref|XP_002518234.1| pentatricopeptide repeat-containing protein,...   249   7e-64

>ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Cucumis sativus]
          Length = 1061

 Score =  251 bits (642), Expect = 1e-64
 Identities = 130/257 (50%), Positives = 175/257 (68%), Gaps = 1/257 (0%)
 Frame = +2

Query: 68  LLSLLNGGFAPTIEDFNNFPVFLFQTKRFQCIIRLFSQMNSNQ-KVDSQTLTIFTKALLR 244
           L +LL  GF+PT++  N+F  FL+  +RF  +I  F Q+N+NQ K +S+T  I + ALL+
Sbjct: 29  LQTLLKSGFSPTLKSINHFFRFLYHNRRFDYVIHFFYQLNANQIKGNSKTHLILSWALLK 88

Query: 245 EQKYEEALHFLRAHMGKTKILDQNRIFDTLIQGLCRSKNDPEKGLSVLLDWLGIGGGIVP 424
             KY++    L+  M  + I  +NR+++ LI+G+C +K DP K L VL D       I+P
Sbjct: 89  SHKYDDLEQILKTQMLVSSIFHRNRLWNLLIRGICVNKEDPGKALWVLQDCFR-NHAILP 147

Query: 425 SSFTFCSLIYGFSLQGKMDRVIEVLELMTCEKFNYPFDNFVCSSVISGFLRIGKPELAIG 604
           SSFTFC LI+ F   G MD+ +E+LELM+ E  NYPFDNFVCSSVISGF  IGKPELA+ 
Sbjct: 148 SSFTFCVLIHKFCSLGMMDKAVEILELMSDENVNYPFDNFVCSSVISGFCNIGKPELALK 207

Query: 605 FYENAVNSDSLKANVVTYTALLNAYFMLGRIEYVSDMVSRMAKDGLPFDVVFYSNWICGY 784
           F+ENA    +LK N+VTYTA++ A   L R+  VSD+V  M K+ L FDVVFYS WICGY
Sbjct: 208 FFENAKTLGNLKPNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENLAFDVVFYSCWICGY 267

Query: 785 FRQGMIEDAFRKYREMI 835
             +GM+ DAF++ REM+
Sbjct: 268 IAEGMLLDAFKRNREMV 284


>ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Cucumis sativus]
          Length = 1085

 Score =  251 bits (642), Expect = 1e-64
 Identities = 130/257 (50%), Positives = 175/257 (68%), Gaps = 1/257 (0%)
 Frame = +2

Query: 68  LLSLLNGGFAPTIEDFNNFPVFLFQTKRFQCIIRLFSQMNSNQ-KVDSQTLTIFTKALLR 244
           L +LL  GF+PT++  N+F  FL+  +RF  +I  F Q+N+NQ K +S+T  I + ALL+
Sbjct: 29  LQTLLKSGFSPTLKSINHFFRFLYHNRRFDYVIHFFYQLNANQIKGNSKTHLILSWALLK 88

Query: 245 EQKYEEALHFLRAHMGKTKILDQNRIFDTLIQGLCRSKNDPEKGLSVLLDWLGIGGGIVP 424
             KY++    L+  M  + I  +NR+++ LI+G+C +K DP K L VL D       I+P
Sbjct: 89  SHKYDDLEQILKTQMLVSSIFHRNRLWNLLIRGICVNKEDPGKALWVLQDCFR-NHAILP 147

Query: 425 SSFTFCSLIYGFSLQGKMDRVIEVLELMTCEKFNYPFDNFVCSSVISGFLRIGKPELAIG 604
           SSFTFC LI+ F   G MD+ +E+LELM+ E  NYPFDNFVCSSVISGF  IGKPELA+ 
Sbjct: 148 SSFTFCVLIHKFCSLGMMDKAVEILELMSDENVNYPFDNFVCSSVISGFCNIGKPELALK 207

Query: 605 FYENAVNSDSLKANVVTYTALLNAYFMLGRIEYVSDMVSRMAKDGLPFDVVFYSNWICGY 784
           F+ENA    +LK N+VTYTA++ A   L R+  VSD+V  M K+ L FDVVFYS WICGY
Sbjct: 208 FFENAKTLGNLKPNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENLAFDVVFYSCWICGY 267

Query: 785 FRQGMIEDAFRKYREMI 835
             +GM+ DAF++ REM+
Sbjct: 268 IAEGMLLDAFKRNREMV 284


>dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
          Length = 1012

 Score =  251 bits (641), Expect = 1e-64
 Identities = 128/277 (46%), Positives = 186/277 (67%), Gaps = 2/277 (0%)
 Frame = +2

Query: 14  VFSKLSI-LYRRNNHKTLSLLSLLNGGFAPTIEDFNNFPVFLFQTKRFQCIIRLFSQMNS 190
           +F ++S+ LY R +    SL SLL  GF+PT+   + F  +L++ ++F CI++ +SQ++S
Sbjct: 36  LFCEISMKLYPRTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDS 95

Query: 191 NQ-KVDSQTLTIFTKALLREQKYEEALHFLRAHMGKTKILDQNRIFDTLIQGLCRSKNDP 367
            Q  ++ +  +I + A L   +YE+A  F+  H+ K  I  +  + D+LI G   +++DP
Sbjct: 96  KQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDP 155

Query: 368 EKGLSVLLDWLGIGGGIVPSSFTFCSLIYGFSLQGKMDRVIEVLELMTCEKFNYPFDNFV 547
            KGL +L D L    G  PSS TFCSLIY F  +G+MD  IEVLE+MT +  NYPFDNFV
Sbjct: 156 SKGLLILRDCLR-NHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFV 214

Query: 548 CSSVISGFLRIGKPELAIGFYENAVNSDSLKANVVTYTALLNAYFMLGRIEYVSDMVSRM 727
           CS+VISGF +IGKPELA+GF+E+AV+S  L  N+VTYT L++A   LG+++ V D+V R+
Sbjct: 215 CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL 274

Query: 728 AKDGLPFDVVFYSNWICGYFRQGMIEDAFRKYREMID 838
             +G  FD VFYSNWI GYF+ G + DA  + REM++
Sbjct: 275 EDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE 311


>ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g57250, mitochondrial; Flags: Precursor
           gi|332009488|gb|AED96871.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 971

 Score =  250 bits (639), Expect = 2e-64
 Identities = 126/269 (46%), Positives = 180/269 (66%), Gaps = 1/269 (0%)
 Frame = +2

Query: 35  LYRRNNHKTLSLLSLLNGGFAPTIEDFNNFPVFLFQTKRFQCIIRLFSQMNSNQ-KVDSQ 211
           LY R +    SL SLL  GF+PT+   + F  +L++ ++F CI++ +SQ++S Q  ++ +
Sbjct: 3   LYPRTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHR 62

Query: 212 TLTIFTKALLREQKYEEALHFLRAHMGKTKILDQNRIFDTLIQGLCRSKNDPEKGLSVLL 391
             +I + A L   +YE+A  F+  H+ K  I  +  + D+LI G   +++DP KGL +L 
Sbjct: 63  IYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILR 122

Query: 392 DWLGIGGGIVPSSFTFCSLIYGFSLQGKMDRVIEVLELMTCEKFNYPFDNFVCSSVISGF 571
           D L    G  PSS TFCSLIY F  +G+MD  IEVLE+MT +  NYPFDNFVCS+VISGF
Sbjct: 123 DCLR-NHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGF 181

Query: 572 LRIGKPELAIGFYENAVNSDSLKANVVTYTALLNAYFMLGRIEYVSDMVSRMAKDGLPFD 751
            +IGKPELA+GF+E+AV+S  L  N+VTYT L++A   LG+++ V D+V R+  +G  FD
Sbjct: 182 CKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFD 241

Query: 752 VVFYSNWICGYFRQGMIEDAFRKYREMID 838
            VFYSNWI GYF+ G + DA  + REM++
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVE 270


>ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542581|gb|EEF44120.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 932

 Score =  249 bits (635), Expect = 7e-64
 Identities = 129/273 (47%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
 Frame = +2

Query: 23  KLSILYRRNNHKTLSLLSLLNGGFAPTIEDFNNFPVFLFQTKRFQCIIRLFSQMNSNQ-K 199
           KLS  +   +  + S+ +LL  GF PT++  N + +FL +  +F  +    SQ+N NQ +
Sbjct: 11  KLSRYFSSFSSASSSIQNLLKRGFTPTLKSINQYLLFLVKIHKFTLVPHFLSQLNQNQIE 70

Query: 200 VDSQTLTIFTKALLREQKYEEALHFLRAHMGKTKILDQNRIF-DTLIQGLCRSKNDPEKG 376
            + QT ++F  ALL+ + +EEA HF++ H  K+    +   F D+LIQ +   + DP K 
Sbjct: 71  GNYQTHSLFLLALLKLKNFEEAEHFIKTHRAKSSSSSKGHKFLDSLIQAISTDEKDPNKA 130

Query: 377 LSVLLDWLGIGGGIVPSSFTFCSLIYGFSLQGKMDRVIEVLELMTCEKFNYPFDNFVCSS 556
           L VL D L    G++PSSFTFCS+I+ F LQG M   I+VLELM  EK NYPF NFVCSS
Sbjct: 131 LLVLHDCLR-NYGMLPSSFTFCSVIHSFVLQGNMSGAIQVLELMNDEKINYPFCNFVCSS 189

Query: 557 VISGFLRIGKPELAIGFYENAVNSDSLKANVVTYTALLNAYFMLGRIEYVSDMVSRMAKD 736
           ++SGF ++GKPELA+GF+EN++   +LK N+VTYTA++++  MLGR + V D+V  M ++
Sbjct: 190 IVSGFCKMGKPELAMGFFENSLKLGALKPNLVTYTAVVSSLCMLGRADEVFDLVCEMEEE 249

Query: 737 GLPFDVVFYSNWICGYFRQGMIEDAFRKYREMI 835
           GL FDVVFYS WICGYFR G+  +A RK++EM+
Sbjct: 250 GLAFDVVFYSCWICGYFRNGVFIEAIRKHKEMV 282


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