BLASTX nr result
ID: Cephaelis21_contig00036627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00036627
(510 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi... 216 2e-54
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera] 216 2e-54
ref|XP_002523370.1| pentatricopeptide repeat-containing protein,... 194 5e-48
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi... 184 5e-45
ref|NP_192012.2| pentatricopeptide repeat-containing protein [Ar... 170 1e-40
>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 216 bits (550), Expect = 2e-54
Identities = 105/168 (62%), Positives = 135/168 (80%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V +CN LI+MY K + ELAR VF SMENR+ SSWNS+IS +ALG+L++A LF ++E+
Sbjct: 269 VSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELES 328
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSF 365
S++KPDI+TWNCLLSGHF G+ EEVL ILQ+MQ GFKPN+ S+TS LQA+ ELG L+
Sbjct: 329 SDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNM 388
Query: 366 GKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
GKE H +VLRNG D +++VG+SL+DMYVKN L +A+ VF+NMKNRNI
Sbjct: 389 GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNI 436
Score = 129 bits (324), Expect = 2e-28
Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 35/203 (17%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V + LI+MY+K + A+ VF +M+NR++ +WNS++SG S G ++ALRL ME
Sbjct: 405 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 464
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQ---------------------------- 281
IKPD++TWN ++SG+ G +E L +L Q
Sbjct: 465 EGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRD 524
Query: 282 -------MQIAGFKPNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLD 440
MQ G PN+ SIT L+A L LL GKEIHC +RNG ++ V ++L+D
Sbjct: 525 SLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 584
Query: 441 MYVKNDKLINARTVFNNMKNRNI 509
MY K+ L NA VF ++N+ +
Sbjct: 585 MYSKSSSLKNAHKVFRRIQNKTL 607
Score = 72.8 bits (177), Expect = 3e-11
Identities = 41/120 (34%), Positives = 71/120 (59%)
Frame = +3
Query: 147 LDEALRLFRDMEASNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITS 326
L++A ++F +M P+ + WN + + S ++ + + ++MQ + K T +I
Sbjct: 184 LEKANQVFHEMP----NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVR 239
Query: 327 ALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRN 506
LQA ++G L+ K+IH +V R GLD ++ + + L+ MY KN KL AR VF++M+NRN
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V + LI+MY K + + A VF ++N+ L+SWN +I G + G EA+ +F +M+
Sbjct: 576 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQK 635
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQM 284
+ PD IT+ LLS SG E + M
Sbjct: 636 VGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 668
>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 216 bits (550), Expect = 2e-54
Identities = 105/168 (62%), Positives = 135/168 (80%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V +CN LI+MY K + ELAR VF SMENR+ SSWNS+IS +ALG+L++A LF ++E+
Sbjct: 810 VSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELES 869
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSF 365
S++KPDI+TWNCLLSGHF G+ EEVL ILQ+MQ GFKPN+ S+TS LQA+ ELG L+
Sbjct: 870 SDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNM 929
Query: 366 GKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
GKE H +VLRNG D +++VG+SL+DMYVKN L +A+ VF+NMKNRNI
Sbjct: 930 GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNI 977
Score = 129 bits (323), Expect = 3e-28
Identities = 67/168 (39%), Positives = 100/168 (59%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V + LI+MY+K + A+ VF +M+NR++ +WNS++SG S G ++ALRL ME
Sbjct: 946 VYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 1005
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSF 365
IKPD++TWN ++SG+ G + F PN+ SIT L+A L LL
Sbjct: 1006 EGIKPDLVTWNGMISGYAMWGCARK-----------AFMPNSASITCLLRACASLSLLQK 1054
Query: 366 GKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
GKEIHC +RNG ++ V ++L+DMY K+ L NA VF ++N+ +
Sbjct: 1055 GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 1102
Score = 72.8 bits (177), Expect = 3e-11
Identities = 41/120 (34%), Positives = 71/120 (59%)
Frame = +3
Query: 147 LDEALRLFRDMEASNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITS 326
L++A ++F +M P+ + WN + + S ++ + + ++MQ + K T +I
Sbjct: 725 LEKANQVFHEMP----NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVR 780
Query: 327 ALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRN 506
LQA ++G L+ K+IH +V R GLD ++ + + L+ MY KN KL AR VF++M+NRN
Sbjct: 781 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V + LI+MY K + + A VF ++N+ L+SWN +I G + G EA+ +F +M+
Sbjct: 1071 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQK 1130
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQM 284
+ PD IT+ LLS SG E + M
Sbjct: 1131 VGVGPDAITFTALLSACKNSGLIGEGWKYFDSM 1163
>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 695
Score = 194 bits (494), Expect = 5e-48
Identities = 98/166 (59%), Positives = 129/166 (77%)
Frame = +3
Query: 12 ICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEASN 191
I N LI+MY + + L+R VF SM++ +LSSWNS+IS +ALGYL+ A +LF +ME+S+
Sbjct: 303 ISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTALGYLNGAWKLFHEMESSS 362
Query: 192 IKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSFGK 371
+KPDIITWNCLLSGH G ++EVL ILQ+MQ+ GF+PN+ SITS LQ V EL LL GK
Sbjct: 363 VKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRLLKIGK 422
Query: 372 EIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
IH +V+RN L+ +L+V +SLLDMYVKN+ L ++ VF+NMKNRNI
Sbjct: 423 GIHGYVIRNRLNPDLYVEASLLDMYVKNNCLATSQAVFDNMKNRNI 468
Score = 117 bits (294), Expect = 7e-25
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 35/197 (17%)
Frame = +3
Query: 24 LINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEASNIKPD 203
L++MY+K N ++ VF +M+NR++ +WNS+I+G + G D+A RL M+ I+ D
Sbjct: 443 LLDMYVKNNCLATSQAVFDNMKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRAD 502
Query: 204 IITWNCLLSGHFASGFHEEVLRILQ----------------------------------- 278
I+TWN L+SG+ G +EE L ++
Sbjct: 503 IVTWNGLVSGYSIWGHNEEALAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFI 562
Query: 279 QMQIAGFKPNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMYVKND 458
QMQ G KPN+ +++S L+ L LL GKEIHC +++G ++++ ++L+DMY K+
Sbjct: 563 QMQQEGIKPNSTTVSSLLKTCGGLSLLKKGKEIHCLSVKSGFTGDIYIATALVDMYSKSG 622
Query: 459 KLINARTVFNNMKNRNI 509
L +AR VF KN+ +
Sbjct: 623 NLKSAREVFKRTKNKTL 639
Score = 64.3 bits (155), Expect = 1e-08
Identities = 46/162 (28%), Positives = 72/162 (44%)
Frame = +3
Query: 24 LINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEASNIKPD 203
L++ Y +C E+A VF M +RD WN I A+ LFR M+ S K D
Sbjct: 206 LLSYYERCWSLEIANQVFHDMPDRDGLFWNEAIMINLKNERFGNAIELFRGMQFSFAKAD 265
Query: 204 IITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSFGKEIHC 383
T + LQA + L+ GK+IH
Sbjct: 266 AST-----------------------------------VLKMLQACGKEEALNEGKQIHG 290
Query: 384 FVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
+V+++ L+ L + +SL+ MY +N K+I +R VF++MK+ N+
Sbjct: 291 YVIKHALESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNL 332
>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 184 bits (468), Expect = 5e-45
Identities = 91/166 (54%), Positives = 125/166 (75%)
Frame = +3
Query: 12 ICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEASN 191
ICN +++MY + N ELAR VF S E+ +L+SWNS+IS + G L+ A LFR+ME+S+
Sbjct: 269 ICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSS 328
Query: 192 IKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSFGK 371
IKPDIITWN LLSGH G +E VL ++ +Q AGFKP++ SITSALQAV ELG + GK
Sbjct: 329 IKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGK 388
Query: 372 EIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
EIH +++R+ L+Y+++V +SL+DMY+KND L A VF++ KN+NI
Sbjct: 389 EIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNI 434
Score = 104 bits (260), Expect = 7e-21
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 35/203 (17%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENR------------------------------ 95
V +C L++MY+K + E A +VF +N+
Sbjct: 403 VYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKE 462
Query: 96 -----DLSSWNSVISGCSALGYLDEALRLFRDMEASNIKPDIITWNCLLSGHFASGFHEE 260
DL +WNS++SG S G +EAL + +++ + P++++W ++SG + + +
Sbjct: 463 EGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTD 522
Query: 261 VLRILQQMQIAGFKPNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLD 440
L+ QMQ KPN+ +I++ L+A LL G+EIHCF +++G ++++ ++L+D
Sbjct: 523 ALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALID 582
Query: 441 MYVKNDKLINARTVFNNMKNRNI 509
MY K KL A VF N+K + +
Sbjct: 583 MYSKGGKLKVAHEVFRNIKEKTL 605
Score = 63.9 bits (154), Expect = 1e-08
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +3
Query: 129 CSALGYLDEALRLFRDMEASNIKP--DIITWNCLLSGHFASGFHEEVLRILQQMQIAGFK 302
C+ + ++ L + R + + P + WN ++ + S E+ L + ++MQ A K
Sbjct: 170 CALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAK 229
Query: 303 PNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTV 482
G+I LQA +L L+ GK+IH +V+R G + +S++ MY +N++L AR V
Sbjct: 230 ATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAV 289
Query: 483 FNNMKNRNI 509
F++ ++ N+
Sbjct: 290 FDSTEDHNL 298
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
+ I LI+MY K + ++A VF +++ + L WN ++ G + G+ +E LF +M
Sbjct: 574 IYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCK 633
Query: 186 SNIKPDIITWNCLLSGHFASG 248
+ I+PD IT+ LLSG SG
Sbjct: 634 TGIRPDAITFTALLSGCKNSG 654
>ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 170 bits (430), Expect = 1e-40
Identities = 84/168 (50%), Positives = 122/168 (72%)
Frame = +3
Query: 6 VMICNFLINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEA 185
V +CN LI MY + + EL+R VF+SM++R+LSSWNS++S + LGY+D+A+ L +ME
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 186 SNIKPDIITWNCLLSGHFASGFHEEVLRILQQMQIAGFKPNTGSITSALQAVCELGLLSF 365
+KPDI+TWN LLSG+ + G ++ + +L++MQIAG KP+T SI+S LQAV E G L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 366 GKEIHCFVLRNGLDYELHVGSSLLDMYVKNDKLINARTVFNNMKNRNI 509
GK IH ++LRN L Y+++V ++L+DMY+K L AR VF+ M +NI
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI 291
Score = 97.8 bits (242), Expect = 8e-19
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 35/197 (17%)
Frame = +3
Query: 24 LINMYMKCNEPELARIVFSSMENRDLSSWNSVISGCSALGYLDEALRLFRDMEASNIKPD 203
LI+MY+K AR+VF M+ +++ +WNS++SG S L +A L ME IKPD
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 204 IITWNCLLSGHFASGFHEEVL-----------------------------------RILQ 278
ITWN L SG+ G E+ L ++
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 279 QMQIAGFKPNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMYVKND 458
+MQ G PN ++++ L+ + L LL GKE+H F LR L + +V ++L+DMY K+
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 459 KLINARTVFNNMKNRNI 509
L +A +F +KN+++
Sbjct: 446 DLQSAIEIFWGIKNKSL 462
Score = 72.0 bits (175), Expect = 5e-11
Identities = 45/141 (31%), Positives = 78/141 (55%)
Frame = +3
Query: 87 ENRDLSSWNSVISGCSALGYLDEALRLFRDMEASNIKPDIITWNCLLSGHFASGFHEEVL 266
+ R +S+ C +LG+ A +LF +M K D + WN ++ + SG E+ +
Sbjct: 22 DTRVVSASMGFYGRCVSLGF---ANKLFDEMP----KRDDLAWNEIVMVNLRSGNWEKAV 74
Query: 267 RILQQMQIAGFKPNTGSITSALQAVCELGLLSFGKEIHCFVLRNGLDYELHVGSSLLDMY 446
+ ++MQ +G K ++ LQ + G++IH +VLR GL+ + + +SL+ MY
Sbjct: 75 ELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY 134
Query: 447 VKNDKLINARTVFNNMKNRNI 509
+N KL +R VFN+MK+RN+
Sbjct: 135 SRNGKLELSRKVFNSMKDRNL 155