BLASTX nr result
ID: Cephaelis21_contig00036108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00036108 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi... 66 3e-09 ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07 ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 58 7e-07 ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi... 58 7e-07 ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 >ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Vitis vinifera] Length = 667 Score = 65.9 bits (159), Expect = 3e-09 Identities = 40/83 (48%), Positives = 50/83 (60%) Frame = -3 Query: 251 MRLAKALQLPKTITPAINRHTRQAYRTYLSPLPDAHYRIDYTLYGNLIQQCTDRRLVRQA 72 MRL K LQ+ I+P N + S +DY +G LIQ C+D RL+RQA Sbjct: 1 MRLTKFLQIQ--ISPTPNGGIHHCLQNLCSV-----NGLDYGAFGRLIQHCSDHRLLRQA 53 Query: 71 KQLHARLVLSTTILDNFLASKLM 3 KQLHAR+VLS+ DNFLASKL+ Sbjct: 54 KQLHARIVLSSLTPDNFLASKLI 76 >ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Glycine max] Length = 667 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/45 (57%), Positives = 35/45 (77%) Frame = -3 Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3 +D+ YG+ +Q C+D RL+RQ KQLHARL+L + DNFLASKL+ Sbjct: 32 VDFAAYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLI 76 >ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g37310-like [Cucumis sativus] Length = 635 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = -3 Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3 ++Y+ YG LIQ CTD R KQLHARLVLS+ + DNFL SKL+ Sbjct: 1 MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLI 45 >ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37310-like [Cucumis sativus] Length = 595 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = -3 Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3 ++Y+ YG LIQ CTD R KQLHARLVLS+ + DNFL SKL+ Sbjct: 1 MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLI 45 >ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1| predicted protein [Populus trichocarpa] Length = 621 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/44 (59%), Positives = 34/44 (77%) Frame = -3 Query: 134 DYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3 DY LYG L + TD RL QAKQLHARL+LS++ LDN+L ++L+ Sbjct: 16 DYLLYGRLFKYFTDNRLPLQAKQLHARLLLSSSTLDNYLGARLI 59