BLASTX nr result

ID: Cephaelis21_contig00036108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00036108
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    58   7e-07
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/83 (48%), Positives = 50/83 (60%)
 Frame = -3

Query: 251 MRLAKALQLPKTITPAINRHTRQAYRTYLSPLPDAHYRIDYTLYGNLIQQCTDRRLVRQA 72
           MRL K LQ+   I+P  N       +   S        +DY  +G LIQ C+D RL+RQA
Sbjct: 1   MRLTKFLQIQ--ISPTPNGGIHHCLQNLCSV-----NGLDYGAFGRLIQHCSDHRLLRQA 53

Query: 71  KQLHARLVLSTTILDNFLASKLM 3
           KQLHAR+VLS+   DNFLASKL+
Sbjct: 54  KQLHARIVLSSLTPDNFLASKLI 76


>ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Glycine max]
          Length = 667

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -3

Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3
           +D+  YG+ +Q C+D RL+RQ KQLHARL+L +   DNFLASKL+
Sbjct: 32  VDFAAYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLI 76


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -3

Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3
           ++Y+ YG LIQ CTD    R  KQLHARLVLS+ + DNFL SKL+
Sbjct: 1   MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLI 45


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -3

Query: 137 IDYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3
           ++Y+ YG LIQ CTD    R  KQLHARLVLS+ + DNFL SKL+
Sbjct: 1   MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLI 45


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 134 DYTLYGNLIQQCTDRRLVRQAKQLHARLVLSTTILDNFLASKLM 3
           DY LYG L +  TD RL  QAKQLHARL+LS++ LDN+L ++L+
Sbjct: 16  DYLLYGRLFKYFTDNRLPLQAKQLHARLLLSSSTLDNYLGARLI 59


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