BLASTX nr result

ID: Cephaelis21_contig00035997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035997
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17575.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
ref|XP_003631109.1| Pentatricopeptide repeat-containing protein ...   100   2e-19
ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    99   3e-19
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,...    99   4e-19

>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/91 (63%), Positives = 70/91 (76%)
 Frame = -2

Query: 275 GAFLAFEYSSKLGIKVERSAYLSLIGLSIRTNALAKVVDIVDEMIRAGISLGTPQSALLV 96
           GA LAFEYS K+GI +ER AYL+L+G+ IR N+  KV DIV++M+RAGISLG    ALL+
Sbjct: 480 GALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLI 539

Query: 95  YRLGHARDIVSAVKVFSLLPNEQKNTATYTA 3
           YRLG AR   SA KVF LLP++QK TA YTA
Sbjct: 540 YRLGCARRPGSAAKVFGLLPDDQKGTAAYTA 570


>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Vitis vinifera]
          Length = 519

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/91 (63%), Positives = 70/91 (76%)
 Frame = -2

Query: 275 GAFLAFEYSSKLGIKVERSAYLSLIGLSIRTNALAKVVDIVDEMIRAGISLGTPQSALLV 96
           GA LAFEYS K+GI +ER AYL+L+G+ IR N+  KV DIV++M+RAGISLG    ALL+
Sbjct: 343 GALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLI 402

Query: 95  YRLGHARDIVSAVKVFSLLPNEQKNTATYTA 3
           YRLG AR   SA KVF LLP++QK TA YTA
Sbjct: 403 YRLGCARRPGSAAKVFGLLPDDQKGTAAYTA 433


>ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525131|gb|AET05585.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 687

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/91 (56%), Positives = 67/91 (73%)
 Frame = -2

Query: 275 GAFLAFEYSSKLGIKVERSAYLSLIGLSIRTNALAKVVDIVDEMIRAGISLGTPQSALLV 96
           GA LAF YS  +GI +ER+ YLSL+GL  R+N  +K+V+IV EM RAG SLG   ++LL+
Sbjct: 511 GALLAFNYSVTMGISIERTGYLSLVGLLNRSNMFSKLVEIVGEMTRAGHSLGIYLASLLI 570

Query: 95  YRLGHARDIVSAVKVFSLLPNEQKNTATYTA 3
           YRLG AR +  A+K+F+LLP+  K  ATYTA
Sbjct: 571 YRLGCARQLSIALKIFNLLPDNHKCVATYTA 601


>ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g01390-like [Glycine max]
          Length = 545

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/91 (56%), Positives = 69/91 (75%)
 Frame = -2

Query: 275 GAFLAFEYSSKLGIKVERSAYLSLIGLSIRTNALAKVVDIVDEMIRAGISLGTPQSALLV 96
           GA LAF+YS  +GI +ER+ YLSLIGL IR+N  +K+V+IV+EM RAG SLGT  ++LL 
Sbjct: 367 GALLAFKYSVTMGISIERTGYLSLIGLLIRSNMFSKLVEIVEEMTRAGYSLGTYLASLLX 426

Query: 95  YRLGHARDIVSAVKVFSLLPNEQKNTATYTA 3
           + LG A+    A+K+F+LLP+  K TAT+TA
Sbjct: 427 HXLGCAKKHTLAMKIFNLLPDNHKCTATFTA 457


>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/90 (58%), Positives = 67/90 (74%)
 Frame = -2

Query: 272 AFLAFEYSSKLGIKVERSAYLSLIGLSIRTNALAKVVDIVDEMIRAGISLGTPQSALLVY 93
           A +AFEYS ++GI +ER+AYL+LIG+ IR+N    V++IV E IR G SLG   SALL++
Sbjct: 297 ALMAFEYSMRVGIDLERTAYLALIGIMIRSNTSLWVLEIVKETIRVGHSLGLYLSALLIH 356

Query: 92  RLGHARDIVSAVKVFSLLPNEQKNTATYTA 3
           RLG AR    A K+F LLP+EQK TATYTA
Sbjct: 357 RLGSARRPNCAAKIFDLLPDEQKCTATYTA 386


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