BLASTX nr result

ID: Cephaelis21_contig00035897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035897
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK35158.1|AF299074_1 polyprotein, partial [Spiraea yellow le...   125   3e-27
ref|YP_006495799.1| polyprotein [Gooseberry vein banding virus] ...   123   1e-26
gb|AEE39279.1| polyprotein [Gooseberry vein banding virus]            123   1e-26
gb|AEE39276.1| polyprotein [Gooseberry vein banding virus]            123   1e-26
gb|AEE39273.1| polyprotein [Gooseberry vein banding virus]            123   1e-26

>gb|AAK35158.1|AF299074_1 polyprotein, partial [Spiraea yellow leafspot virus]
          Length = 456

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/106 (55%), Positives = 79/106 (74%)
 Frame = +3

Query: 3   GLILSPTKYQIAMTKVDFLGVTITDQTVMMQPHILQKILHFDVTTLKTLKGLRSWLGLIQ 182
           GL+LSPTK ++A+T+VDFLG TI   ++ +Q H+++KI   D  +LKTLKGLRSWLG++ 
Sbjct: 24  GLVLSPTKMKVAVTEVDFLGATIGAGSIKLQSHVIKKIAEVDDESLKTLKGLRSWLGVLN 83

Query: 183 YAKPVIPNLGKLLGPLYALTTEKGKHYLSPSDWDTVAQIKELVANL 320
           YA+  IP  G LLGPLY+ T E G   +SPSDW  V Q+K+LV+NL
Sbjct: 84  YARNYIPKCGTLLGPLYSKTGEHGDRRMSPSDWKLVKQVKQLVSNL 129


>ref|YP_006495799.1| polyprotein [Gooseberry vein banding virus]
            gi|392856295|gb|AFM84639.1| polyprotein [Gooseberry vein
            banding virus]
          Length = 1910

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = +3

Query: 3    GLILSPTKYQIAMTKVDFLGVTITDQTVMMQPHILQKILHFDVTTLKTLKGLRSWLGLIQ 182
            GL+LSPTK ++A+T V+FLG  I +  + +QPHI++KI   D  +L+TLKGLRSWLG+I 
Sbjct: 1606 GLVLSPTKMKVAVTTVEFLGAIIGNGKIKLQPHIVKKISEVDDESLRTLKGLRSWLGIIN 1665

Query: 183  YAKPVIPNLGKLLGPLYALTTEKGKHYLSPSDWDTVAQIKELVANL 320
            YA+  IPN G LLGPLY+ T+E G   +SP DW  V ++KELV +L
Sbjct: 1666 YARNYIPNCGTLLGPLYSKTSENGDRRMSPQDWKLVRKVKELVKSL 1711


>gb|AEE39279.1| polyprotein [Gooseberry vein banding virus]
          Length = 1910

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = +3

Query: 3    GLILSPTKYQIAMTKVDFLGVTITDQTVMMQPHILQKILHFDVTTLKTLKGLRSWLGLIQ 182
            GL+LSPTK ++A+T V+FLG  I +  + +QPHI++KI   D  +L+TLKGLRSWLG+I 
Sbjct: 1606 GLVLSPTKMKVAVTTVEFLGAIIGNGKIKLQPHIVKKISEVDDESLRTLKGLRSWLGIIN 1665

Query: 183  YAKPVIPNLGKLLGPLYALTTEKGKHYLSPSDWDTVAQIKELVANL 320
            YA+  IPN G LLGPLY+ T+E G   +SP DW  V ++KELV +L
Sbjct: 1666 YARNYIPNCGTLLGPLYSKTSENGDRRMSPQDWKLVRKVKELVKSL 1711


>gb|AEE39276.1| polyprotein [Gooseberry vein banding virus]
          Length = 1910

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = +3

Query: 3    GLILSPTKYQIAMTKVDFLGVTITDQTVMMQPHILQKILHFDVTTLKTLKGLRSWLGLIQ 182
            GL+LSPTK ++A+T V+FLG  I +  + +QPHI++KI   D  +L+TLKGLRSWLG+I 
Sbjct: 1606 GLVLSPTKMKVAVTTVEFLGAIIGNGKIKLQPHIVKKISEVDDESLRTLKGLRSWLGIIN 1665

Query: 183  YAKPVIPNLGKLLGPLYALTTEKGKHYLSPSDWDTVAQIKELVANL 320
            YA+  IPN G LLGPLY+ T+E G   +SP DW  V ++KELV +L
Sbjct: 1666 YARNYIPNCGTLLGPLYSKTSENGDRRMSPQDWKLVRKVKELVKSL 1711


>gb|AEE39273.1| polyprotein [Gooseberry vein banding virus]
          Length = 1910

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = +3

Query: 3    GLILSPTKYQIAMTKVDFLGVTITDQTVMMQPHILQKILHFDVTTLKTLKGLRSWLGLIQ 182
            GL+LSPTK ++A+T V+FLG  I +  + +QPHI++KI   D  +L+TLKGLRSWLG+I 
Sbjct: 1606 GLVLSPTKMKVAVTTVEFLGAIIGNGKIKLQPHIVKKISEVDDESLRTLKGLRSWLGIIN 1665

Query: 183  YAKPVIPNLGKLLGPLYALTTEKGKHYLSPSDWDTVAQIKELVANL 320
            YA+  IPN G LLGPLY+ T+E G   +SP DW  V ++KELV +L
Sbjct: 1666 YARNYIPNCGTLLGPLYSKTSENGDRRMSPQDWKLVRKVKELVKSL 1711


Top