BLASTX nr result

ID: Cephaelis21_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035878
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...    94   1e-17
ref|XP_002307977.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...    80   2e-13
ref|XP_003622220.1| FAR1-related protein [Medicago truncatula] g...    78   7e-13

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/96 (44%), Positives = 68/96 (70%)
 Frame = -1

Query: 290 EVPQVGMSFLSEDEVRDFYKSYAQHVGFGICKLSSKNGGD*KQKYFSIGCAKSRKTVSRA 111
           E P++GM+F SE+EV  +YKSYA+ +GFG  K++SKN  D K KYF++GC ++R  VS +
Sbjct: 350 EEPRIGMTFSSEEEVIKYYKSYARCMGFGTVKINSKNAKDGK-KYFTLGCTRARSYVSNS 408

Query: 110 KNCFYPRPSTKTNCNAKINVTLQNDGRLIISPVYLD 3
           KN   P P+ +  C A++N+++  DG++ I+ V L+
Sbjct: 409 KNLLKPNPTIRAQCMARVNMSMSLDGKITITKVALE 444


>ref|XP_002307977.1| predicted protein [Populus trichocarpa] gi|222853953|gb|EEE91500.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/97 (43%), Positives = 59/97 (60%)
 Frame = -1

Query: 293 VEVPQVGMSFLSEDEVRDFYKSYAQHVGFGICKLSSKNGGD*KQKYFSIGCAKSRKTVSR 114
           VE P++GM F S++EVRD+Y  YAQ VGFGI + SS+   D +  Y  + C++  K    
Sbjct: 41  VETPKIGMVFASQEEVRDYYNRYAQRVGFGIMRRSSRCDDDGRLTYIVLSCSQCGKDRGI 100

Query: 113 AKNCFYPRPSTKTNCNAKINVTLQNDGRLIISPVYLD 3
            K+ F  + ++KTNC AKIN+ L   G+  I  V LD
Sbjct: 101 PKSRFQWKQTSKTNCKAKINLVLNPQGQFHICNVVLD 137


>ref|XP_002307978.1| predicted protein [Populus trichocarpa] gi|222853954|gb|EEE91501.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = -1

Query: 284 PQVGMSFLSEDEVRDFYKSYAQHVGFGICKLSSKNGGD*KQKYFSIGCAKSRKTVSRAKN 105
           P +GM F + DEVR +Y  YA HVGF   K S+K+G D   KYF++ C++S K +  A  
Sbjct: 30  PSIGMVFNTPDEVRSYYDEYACHVGFNTIKKSTKSGDDGNVKYFTLACSRSGKELPSASQ 89

Query: 104 C----FYPRPSTKTNCNAKINVTLQNDGRLIISPVYLD 3
                F  R   +TNC AK+NVT+  DGR+ +  V L+
Sbjct: 90  TNRFNFRKRLPPRTNCKAKLNVTIGPDGRVYVCRVILE 127


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/90 (42%), Positives = 57/90 (63%)
 Frame = -1

Query: 272 MSFLSEDEVRDFYKSYAQHVGFGICKLSSKNGGD*KQKYFSIGCAKSRKTVSRAKNCFYP 93
           M+F  E+EV  +YKSYA+ +GFG  K++SKN  D K+KYF++GC  +R  VS  KN   P
Sbjct: 1   MTFNYEEEVTRYYKSYARCMGFGTVKINSKNAKDGKKKYFTLGCTCARSYVSNTKNLLKP 60

Query: 92  RPSTKTNCNAKINVTLQNDGRLIISPVYLD 3
            P  +  C A++N+    D ++ I+ V L+
Sbjct: 61  NPIIRAQCMARVNMCQSLDEKIAITKVALE 90


>ref|XP_003622220.1| FAR1-related protein [Medicago truncatula]
           gi|355497235|gb|AES78438.1| FAR1-related protein
           [Medicago truncatula]
          Length = 82

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/82 (45%), Positives = 57/82 (69%)
 Frame = -1

Query: 266 FLSEDEVRDFYKSYAQHVGFGICKLSSKNGGD*KQKYFSIGCAKSRKTVSRAKNCFYPRP 87
           F S++++ ++YKSYA  +GFG+ KLSSK G D K KYF++  ++  K VS++KN   P P
Sbjct: 2   FSSKEKLIEYYKSYAWSIGFGVSKLSSKTGDDGK-KYFTLAYSRGTKYVSKSKNMLKPNP 60

Query: 86  STKTNCNAKINVTLQNDGRLII 21
           S KT C A++N +++ DG + I
Sbjct: 61  SIKTQCKARLNTSIRLDGIVTI 82


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