BLASTX nr result

ID: Cephaelis21_contig00035792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035792
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   5e-09
ref|XP_003549288.1| PREDICTED: uncharacterized protein LOC100791...    64   5e-08
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    59   1e-06
gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebenne...    59   1e-06
ref|XP_003589692.1| hypothetical protein MTR_1g035150 [Medicago ...    58   4e-06

>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = -2

Query: 1034 FQHLPLHLFQKGPLMSLASLIGHPLRIDAAIRTFARPSETQVCVEVNLLQNLPKRVWISQ 855
            F  LPL  + K  L ++A  +G P+++D A    AR    +VC+E++L + L  +VW+++
Sbjct: 215  FPELPLEYYDKEALFAIAGKVGKPIKVDYATDHMARGRYARVCIELDLAKALVSKVWVAR 274

Query: 854  GDSGFWQSVTYESLPPYCSSCYLIGHVTGECA 759
                 WQ+V YE+L   C  C  IGH   +C+
Sbjct: 275  A----WQNVEYENLSLVCFLCGKIGHRRDQCS 302


>ref|XP_003549288.1| PREDICTED: uncharacterized protein LOC100791212 [Glycine max]
          Length = 470

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 12/193 (6%)
 Frame = -2

Query: 1034 FQHLPLHLFQKGPLMSLASLIGHPLRIDAAIRTFARPSETQVCVEVNLLQNLPKRVWISQ 855
            F  L L  + +  L++LA  IG P+++D+      R    ++CV+++L + +  +V    
Sbjct: 183  FPSLNLIYYDENILLALARAIGTPIKVDSNTLDVRRGHFARICVQIDLNKPVVGKV---- 238

Query: 854  GDSGFWQSVTYESLPPYCSSCYLIGHVTGECASAAK--------GK*STVTWRPQS---- 711
            G  G+W  V YE L   CSSC   GH+  EC + AK        G+   V  +P +    
Sbjct: 239  GLKGYWYKVEYEGLHRICSSCGCYGHLARECPTPAKTPMMDVLHGEWLVVKRKPSNKTNK 298

Query: 710  GAASKDKAPHPRHSISGLSMAAKGTIPTDIVRTCDNVSPSAASDVPLTVSLKVTNNPANV 531
              A  +K  +P++    L    K  I +  +   D  S S     P TV         N 
Sbjct: 299  NQAKGNKDGNPKNQRQSLLNEKKEKINSITLNAHDTASGSHTDVAPTTVERSSNGKQKNK 358

Query: 530  APGSSTTASPNAS 492
                 T   P  S
Sbjct: 359  RVRRDTVTIPRVS 371


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
            sativus]
          Length = 169

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/88 (34%), Positives = 46/88 (52%)
 Frame = -2

Query: 1025 LPLHLFQKGPLMSLASLIGHPLRIDAAIRTFARPSETQVCVEVNLLQNLPKRVWISQGDS 846
            +PL L+    L+ +AS IG PL +D A +   R S  ++CVE+N+   +P  + ++    
Sbjct: 60   IPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNLRGE 119

Query: 845  GFWQSVTYESLPPYCSSCYLIGHVTGEC 762
             F   VTYE  P  C+ C+  GH    C
Sbjct: 120  EFIVPVTYEWKPRKCNLCHSFGHSQSTC 147


>gb|ABW81177.1| gag non-LTR retrotransposase [Arabidopsis cebennensis]
          Length = 496

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = -2

Query: 1028 HLPLHLFQKGPLMSLASLIGHPLRIDAAIRTFARPSETQVCVEVNLLQNLPKRVWISQGD 849
            +LP+  + K  LM +A  +GHP+++D     F R    +VCVEVNL + L   V +    
Sbjct: 165  NLPVTFYHKTILMGIAKGLGHPVKVDLITIRFDRGRFARVCVEVNLKRPLKGTVMV---- 220

Query: 848  SGFWQSVTYESLPPYCSSCYLIGHVTGECASA 753
            +G    V+YE L   CS C + GH+   C+ A
Sbjct: 221  NGRRYYVSYEGLNAICSKCGMYGHLVHTCSQA 252


>ref|XP_003589692.1| hypothetical protein MTR_1g035150 [Medicago truncatula]
            gi|355478740|gb|AES59943.1| hypothetical protein
            MTR_1g035150 [Medicago truncatula]
          Length = 509

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 3/218 (1%)
 Frame = -2

Query: 1025 LPLHLFQKGPLMSLASLIGHPLRIDAAIRTFARPSETQVCVEVNLLQNLPKRVWISQGDS 846
            LP   +    L  +AS IG  L ID+A +        +V V+++L +++   V I +   
Sbjct: 176  LPQEFWMDRTLREIASAIGTLLLIDSATQNRVFGHYARVLVDMDLSKHIFNEVMIERTGF 235

Query: 845  GFWQSVTYESLPPYCSSCYLIGHVTGECASAAKGK*STVTWRPQSGAASKDKAP---HPR 675
             F   ++YE LP +C+ C  IGH T  C      K   V  + +    S+ + P    P+
Sbjct: 236  SFAIGISYERLPVFCTHCGNIGHHTSSCRWLHPVKEIPVIDKKKKSIVSQKQQPPEWQPK 295

Query: 674  HSISGLSMAAKGTIPTDIVRTCDNVSPSAASDVPLTVSLKVTNNPANVAPGSSTTASPNA 495
             ++ G+  +     P       D        +V   + ++  N  +  A  S+  +S + 
Sbjct: 296  DNLDGIGSSKAFEAPVGNNNNNDVEDIPVLQEVAKNLPVQADNTESATAQHSAVVSSQDV 355

Query: 494  SPVDFFDVPVQISHGQDSIDQTLKGASLDPTSRAQDSS 381
            +  D  D+ V      D   +TL   S+    +  DS+
Sbjct: 356  A-TDQHDIEVIPVVDDDIRKETLPNTSIHVLEKVSDSA 392


Top