BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035738
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...    57   2e-06
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...    56   3e-06
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...    56   3e-06
ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [S...    56   3e-06
ref|XP_002514231.1| RNA-dependent RNA polymerase, putative [Rici...    56   3e-06

>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -1

Query: 151 YFLFLLMVPFLHFPPGKL-VYRDNGQISGKVLVYRNPGLHFGDIHVLEAVY 2
           Y+L   + P      G++ V   NGQI+GKVLVYRNPGLHFGDIHVL A Y
Sbjct: 678 YYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKY 728


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 97  VYRDNGQISGKVLVYRNPGLHFGDIHVLEAVY 2
           V  ++GQISG+VLVYRNPGLHFGDIH+L+A Y
Sbjct: 618 VILESGQISGEVLVYRNPGLHFGDIHILKATY 649


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 97  VYRDNGQISGKVLVYRNPGLHFGDIHVLEAVY 2
           V  ++GQISG+VLVYRNPGLHFGDIH+L+A Y
Sbjct: 622 VILESGQISGEVLVYRNPGLHFGDIHILKATY 653


>ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [Sorghum bicolor]
           gi|241926977|gb|EES00122.1| hypothetical protein
           SORBIDRAFT_03g002800 [Sorghum bicolor]
          Length = 1127

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -1

Query: 88  DNGQISGKVLVYRNPGLHFGDIHVLEAVY 2
           DNGQ+SGKVLVY++PGLHFGDIH+L A Y
Sbjct: 763 DNGQLSGKVLVYKHPGLHFGDIHILTATY 791


>ref|XP_002514231.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223546687|gb|EEF48185.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 114

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -1

Query: 88  DNGQISGKVLVYRNPGLHFGDIHVLEAVY 2
           DN  ISGKVLVYRNPGLHFGDIHVL+A Y
Sbjct: 24  DNEHISGKVLVYRNPGLHFGDIHVLKATY 52