BLASTX nr result

ID: Cephaelis21_contig00035703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035703
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   207   4e-51
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   204   2e-50
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   202   7e-50
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   202   7e-50
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   201   2e-49

>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  207 bits (526), Expect = 4e-51
 Identities = 108/242 (44%), Positives = 153/242 (63%)
 Frame = -3

Query: 775 QFMHSILEPPQSSKDAIFASICDSLIKGLSWEXXXXXXXXXXXXXXLIQKVLLHLKEPVN 596
           +F+H+  +P     DAI  +ICDSL +G +W               L++KVLL LKEP++
Sbjct: 33  RFVHNDAKP---DGDAIVYAICDSLRRGHNWVSLSGKFQYVELNHLLVEKVLLELKEPID 89

Query: 595 AKHALRFFHWSAHHTNLQHGISTYCIAIHIXXXXXXXXXXXXXLESILAKPFEVTDSGID 416
           AK AL FFHWSA   N  HG+ +YC+ ++I             LESIL K  E      D
Sbjct: 90  AKRALGFFHWSAQRKNFVHGVWSYCLMVNILVRAQLLNDAQALLESILKKNVE------D 143

Query: 415 SKMLYVLKSLIEYYETMDSAPFAFDLFMQTCAKLRLIDDVVDACKLLDEYGFGLSVISYN 236
           S    ++ SL++ Y+ + S+P  F+L +Q  AKLRL +     C  L+E+GF LS++S+N
Sbjct: 144 SSEFLIVDSLLDSYKIIVSSPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFN 203

Query: 235 TILHVMQKSEKTYLVWSLYEHMIEKRMFPNEVTYRIMVSALCKEGTLKRFLDMLERIHGK 56
           T++HV+QKS++  LVW +YEHMI KR++PNE T R M++ALCKEG L+ F+D+L+RIHGK
Sbjct: 204 TLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGK 263

Query: 55  RC 50
           RC
Sbjct: 264 RC 265


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  204 bits (520), Expect = 2e-50
 Identities = 105/223 (47%), Positives = 142/223 (63%)
 Frame = -3

Query: 715 ICDSLIKGLSWEXXXXXXXXXXXXXXLIQKVLLHLKEPVNAKHALRFFHWSAHHTNLQHG 536
           +CDSL +GL+W+               + +VLL LK+P++AK AL FFHWSA   NL+HG
Sbjct: 44  LCDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHG 103

Query: 535 ISTYCIAIHIXXXXXXXXXXXXXLESILAKPFEVTDSGIDSKMLYVLKSLIEYYETMDSA 356
           +++YCI IHI             LES L K          S+ L V+ SL+  Y    S 
Sbjct: 104 LASYCITIHILVGAQLLMDAQSLLESTLKK-------NAGSRFL-VVDSLLSSYNITGSN 155

Query: 355 PFAFDLFMQTCAKLRLIDDVVDACKLLDEYGFGLSVISYNTILHVMQKSEKTYLVWSLYE 176
           P  FDL +Q+ +KLR+ +   D C  L+E+GF LS+IS+NT+LHV+QKS+   LVW +YE
Sbjct: 156 PRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYE 215

Query: 175 HMIEKRMFPNEVTYRIMVSALCKEGTLKRFLDMLERIHGKRCS 47
           HMI  R +PNEV+  +M+SALCKEG L++F+DML+RIHGKRCS
Sbjct: 216 HMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  202 bits (515), Expect = 7e-50
 Identities = 112/246 (45%), Positives = 150/246 (60%), Gaps = 4/246 (1%)
 Frame = -3

Query: 769 MHSILEPPQSSK----DAIFASICDSLIKGLSWEXXXXXXXXXXXXXXLIQKVLLHLKEP 602
           M +++  P + K    DA   SICDSL +  SW+              L+QKVLL  ++P
Sbjct: 1   MRNLISIPVADKLINDDATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQP 60

Query: 601 VNAKHALRFFHWSAHHTNLQHGISTYCIAIHIXXXXXXXXXXXXXLESILAKPFEVTDSG 422
           V+AK AL FFHWSA   N  HG  ++ I IHI             LESIL K     + G
Sbjct: 61  VDAKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKK-----NEG 115

Query: 421 IDSKMLYVLKSLIEYYETMDSAPFAFDLFMQTCAKLRLIDDVVDACKLLDEYGFGLSVIS 242
            +S    V+ SL++ YE   S+PF FDL +QTCAKLRLID  +  C  L+E GF LS+IS
Sbjct: 116 -NSFDYSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLIS 174

Query: 241 YNTILHVMQKSEKTYLVWSLYEHMIEKRMFPNEVTYRIMVSALCKEGTLKRFLDMLERIH 62
           +NT++HV++KS++   VW +YE MI KR++PN +T RIM+++LCKEG L+   DML RIH
Sbjct: 175 FNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIH 234

Query: 61  GKRCSS 44
           G RCS+
Sbjct: 235 GSRCSA 240


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  202 bits (515), Expect = 7e-50
 Identities = 104/223 (46%), Positives = 141/223 (63%)
 Frame = -3

Query: 715 ICDSLIKGLSWEXXXXXXXXXXXXXXLIQKVLLHLKEPVNAKHALRFFHWSAHHTNLQHG 536
           +CDSL +GL+W+               + +VLL LK+P++AK AL FFHWSA   NL+HG
Sbjct: 44  LCDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHG 103

Query: 535 ISTYCIAIHIXXXXXXXXXXXXXLESILAKPFEVTDSGIDSKMLYVLKSLIEYYETMDSA 356
           +++YCI IHI             LES L K          S+ L V+ SL+  Y    S 
Sbjct: 104 VASYCITIHILVGAHLLMDAQSLLESTLKK-------NAGSRFL-VVDSLLSSYNITGSN 155

Query: 355 PFAFDLFMQTCAKLRLIDDVVDACKLLDEYGFGLSVISYNTILHVMQKSEKTYLVWSLYE 176
           P  FDL +Q+ +KLR+ +   D C  L+E+GF LS+IS+N +LHV+QKS+   LVW +YE
Sbjct: 156 PRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYE 215

Query: 175 HMIEKRMFPNEVTYRIMVSALCKEGTLKRFLDMLERIHGKRCS 47
           HMI  R +PNEV+  +M+SALCKEG L++F+DML+RIHGKRCS
Sbjct: 216 HMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCS 258


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  201 bits (512), Expect = 2e-49
 Identities = 109/230 (47%), Positives = 143/230 (62%)
 Frame = -3

Query: 733 DAIFASICDSLIKGLSWEXXXXXXXXXXXXXXLIQKVLLHLKEPVNAKHALRFFHWSAHH 554
           DA   SICDSL +  SW+              L+QKVLL  ++PV+AK AL FFHWSA  
Sbjct: 39  DATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKR 98

Query: 553 TNLQHGISTYCIAIHIXXXXXXXXXXXXXLESILAKPFEVTDSGIDSKMLYVLKSLIEYY 374
            N  HG  ++ I IHI             LESIL K     + G +S    V+ SL++ Y
Sbjct: 99  KNFNHGPQSFGIMIHILVKARLVLDARALLESILKK-----NEG-NSFDYSVVDSLMDSY 152

Query: 373 ETMDSAPFAFDLFMQTCAKLRLIDDVVDACKLLDEYGFGLSVISYNTILHVMQKSEKTYL 194
           E   S+PF FDL +QTCAKLRLID  +  C  L+E GF LS+IS+NT++HV++KS++   
Sbjct: 153 EVTGSSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLK 212

Query: 193 VWSLYEHMIEKRMFPNEVTYRIMVSALCKEGTLKRFLDMLERIHGKRCSS 44
           VW +YE MI KR++PN +T RIM+++LCKEG L+   DML RIHG RCS+
Sbjct: 213 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSA 262


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